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The map label for this gene is flgC [H]

Identifier: 183220163

GI number: 183220163

Start: 767512

End: 767973

Strand: Reverse

Name: flgC [H]

Synonym: LEPBI_I0751

Alternate gene names: 183220163

Gene position: 767973-767512 (Counterclockwise)

Preceding gene: 183220164

Following gene: 183220162

Centisome position: 21.33

GC content: 47.4

Gene sequence:

>462_bases
ATGGGTATGTTTGATTCGATTAATATTTCCGCGACTGGGCTTTCGGCCCAAAGACTCCGAATGGATGTCATTTCGAATAA
CATTGCAAACTCAACCACAACGAGAAATACCAATGGGGATGGACCATTTCGTCGTGACCGCGTAATCCTAACACCGATTA
ACCTTAGAACCCAATGGAAGAGCCCTGTGTATCCTTTTGGGGTAGCCCCTGGAGAAGGAAAAGGGGTCAAGGTGATGAAA
ATTGAAAAGGACATGAGCCCACTTCGATTGACCTATGACCCAACCCACCCCGATGCCATCCAAACTGGGCCCAAAAAAGG
ATACGTCGAACTTCCCAATATCAACATTGTCACCGAGATGACGGATATGATCTCAGCTTCCCGTTCCTACGAAGCCAATG
TCCAACTCATCAACGGATCCAAGGCAATGATGAACAAAGCAATGGAGATCGGTCGGGCCTAA

Upstream 100 bases:

>100_bases
GCCAATCAAAATCAAATGAGTTATAGTTTGATGATTGATAGACTCAACCAAAACAACCGCCTTCTCAACATTGTGATGAG
AACCAACTAAGGAGTAAACG

Downstream 100 bases:

>100_bases
CCTCGCCTGACCTTTCCCAAACATTTTTCCATTTTGATCCTGGTTTTTCCCATGTGACATAATTTTTTACTTTAGGTTTT
CGAAAACCAACCGATGATAT

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MGMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSPVYPFGVAPGEGKGVKVMK
IEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEMTDMISASRSYEANVQLINGSKAMMNKAMEIGRA

Sequences:

>Translated_153_residues
MGMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSPVYPFGVAPGEGKGVKVMK
IEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEMTDMISASRSYEANVQLINGSKAMMNKAMEIGRA
>Mature_152_residues
GMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWKSPVYPFGVAPGEGKGVKVMKI
EKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEMTDMISASRSYEANVQLINGSKAMMNKAMEIGRA

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=153, Percent_Identity=33.9869281045752, Blast_Score=93, Evalue=9e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16847; Mature: 16715

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWK
CCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCC
SPVYPFGVAPGEGKGVKVMKIEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEM
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHCCCCCCCEEECCCCEEEHHH
TDMISASRSYEANVQLINGSKAMMNKAMEIGRA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure 
GMFDSINISATGLSAQRLRMDVISNNIANSTTTRNTNGDGPFRRDRVILTPINLRTQWK
CCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCC
SPVYPFGVAPGEGKGVKVMKIEKDMSPLRLTYDPTHPDAIQTGPKKGYVELPNINIVTEM
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHCCCCCCCEEECCCCEEEHHH
TDMISASRSYEANVQLINGSKAMMNKAMEIGRA
HHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]