| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220098
Identifier: 183220098
GI number: 183220098
Start: 694388
End: 695728
Strand: Reverse
Name: 183220098
Synonym: LEPBI_I0686
Alternate gene names: NA
Gene position: 695728-694388 (Counterclockwise)
Preceding gene: 183220099
Following gene: 183220096
Centisome position: 19.33
GC content: 39.45
Gene sequence:
>1341_bases ATGGATGTCGCTAAACTAGATACTTGGTATCGCAGACTTCTTGTACTATCTTCTGTTATATGTGGAGGATTCCAGGTATA CTACGAAGGGAATGTTTGGATCAACGCAATCTTTGTCGTACTCATGGCGGGGATGGTAGGATATTATACAAATTTCCTTG CAATCAAAATGTTATTCCAACCAAAACATGGTAAGGTGCTAGGTTGGTCAGGACTTGTTCCCAAAAACAAATCCAAAATT GCCAAATCACTCGGCGAAAGTATCCAAAGTAACTTACTCCATCCCGATATCATCCTTGCTTATATTTATGAAAGGAACTT GGTGGAGACTGGCATTCAAAAAATAGTCAAAGAAATTGATGAAGCCATTCACAACGACGAAATCCGTACCATCCTAGTCA CAAAAATCATCTCCATGTTAAAAGAACGTGGGCCAGAAATTTTAGAAGTCATCTTTGATTTTTCAGAAGAGACAATGAAA AAAATGGCAGAACGCCCAGAGGAAGTCCAAAAACTTTGGGAATACACTCGAAACCGCCTAACGTATTACTTAACGGAAGA AACAAATCGAGAAGAACTTGGGCAACAACTTCGTGTGGTTTTACTTGAAGAGATGCCGAAGCTCGCAAACCTCCTGAACG AAGGGCTTGAAGAATATTTAAAAACGAGAAGTACGCTTGGTAAAATTGGGATTGGTGTGAAAAAAATATTTTCCTTCAAC GAAGATGCCATTCGTGAACTTTTAGAACGATTTGTCAAAGACCCTGAAACATCGGATCAGTTCATGAAAATGATGGATGA TATGATGGCAGGATTACAAGAAAGACTCAATTCGAAGGAAACCCAAGAATTCATTACGGGTAAAATTTCCAACTGGTTAG AGGCAAGTGGTGATTATGCGAGACAAAACCTATTACCTTCCGGCATCGAACGCTTGCAAGCCTATTTAGATGATCCGAAT AATTGGGAAGAAATTGAAAAAAACTTTTTTCGTGCGGTAGATTGGGTAAAAAAACGCCTTCTTGAGTTTATGAATAGTGA AGAAGGAAAAACCTATCTCAAAACCAATATTGAAAAGTTTGTCCACAACATCAACGTGACGGCTCTTGTCGAAGAACGAG TGATGGCACTAGACACTGATGATTTAGAAAAAATGATTCTCGACAACACGGGTGGGAATCTTGTCGTCATACAATTCTTA GGTGGAATCCTCGGAATGATTGCAGGACTCATCCAGGTTCATATTTATTTTGCTGTACCTGTGGGAACTCTTGTACTCAT CACCTACTTTGCCCACTACCGAAACCAAAAACGGTTTGGTGAACCAAAAGAAACAGTTTGA
Upstream 100 bases:
>100_bases GGAAGTTTTAACCAAGGTGCCATTACTGTATCAGAATTGATCCCAAGAGGTTTTTTACGAAAACTGAGTGGCCGATATTT GAAACTAGAAGAGGAATAAG
Downstream 100 bases:
>100_bases AAACTTGCCATGTTTTTTTGATCCAAAATAAGGTGGGTTCCAGGATGCAATTGGAATCGATTGGTCGTAAACAAAACTAC TGTTACATGGATGATTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MDVAKLDTWYRRLLVLSSVICGGFQVYYEGNVWINAIFVVLMAGMVGYYTNFLAIKMLFQPKHGKVLGWSGLVPKNKSKI AKSLGESIQSNLLHPDIILAYIYERNLVETGIQKIVKEIDEAIHNDEIRTILVTKIISMLKERGPEILEVIFDFSEETMK KMAERPEEVQKLWEYTRNRLTYYLTEETNREELGQQLRVVLLEEMPKLANLLNEGLEEYLKTRSTLGKIGIGVKKIFSFN EDAIRELLERFVKDPETSDQFMKMMDDMMAGLQERLNSKETQEFITGKISNWLEASGDYARQNLLPSGIERLQAYLDDPN NWEEIEKNFFRAVDWVKKRLLEFMNSEEGKTYLKTNIEKFVHNINVTALVEERVMALDTDDLEKMILDNTGGNLVVIQFL GGILGMIAGLIQVHIYFAVPVGTLVLITYFAHYRNQKRFGEPKETV
Sequences:
>Translated_446_residues MDVAKLDTWYRRLLVLSSVICGGFQVYYEGNVWINAIFVVLMAGMVGYYTNFLAIKMLFQPKHGKVLGWSGLVPKNKSKI AKSLGESIQSNLLHPDIILAYIYERNLVETGIQKIVKEIDEAIHNDEIRTILVTKIISMLKERGPEILEVIFDFSEETMK KMAERPEEVQKLWEYTRNRLTYYLTEETNREELGQQLRVVLLEEMPKLANLLNEGLEEYLKTRSTLGKIGIGVKKIFSFN EDAIRELLERFVKDPETSDQFMKMMDDMMAGLQERLNSKETQEFITGKISNWLEASGDYARQNLLPSGIERLQAYLDDPN NWEEIEKNFFRAVDWVKKRLLEFMNSEEGKTYLKTNIEKFVHNINVTALVEERVMALDTDDLEKMILDNTGGNLVVIQFL GGILGMIAGLIQVHIYFAVPVGTLVLITYFAHYRNQKRFGEPKETV >Mature_446_residues MDVAKLDTWYRRLLVLSSVICGGFQVYYEGNVWINAIFVVLMAGMVGYYTNFLAIKMLFQPKHGKVLGWSGLVPKNKSKI AKSLGESIQSNLLHPDIILAYIYERNLVETGIQKIVKEIDEAIHNDEIRTILVTKIISMLKERGPEILEVIFDFSEETMK KMAERPEEVQKLWEYTRNRLTYYLTEETNREELGQQLRVVLLEEMPKLANLLNEGLEEYLKTRSTLGKIGIGVKKIFSFN EDAIRELLERFVKDPETSDQFMKMMDDMMAGLQERLNSKETQEFITGKISNWLEASGDYARQNLLPSGIERLQAYLDDPN NWEEIEKNFFRAVDWVKKRLLEFMNSEEGKTYLKTNIEKFVHNINVTALVEERVMALDTDDLEKMILDNTGGNLVVIQFL GGILGMIAGLIQVHIYFAVPVGTLVLITYFAHYRNQKRFGEPKETV
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 - InterPro: IPR016991 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 51540; Mature: 51540
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVAKLDTWYRRLLVLSSVICGGFQVYYEGNVWINAIFVVLMAGMVGYYTNFLAIKMLFQ CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKHGKVLGWSGLVPKNKSKIAKSLGESIQSNLLHPDIILAYIYERNLVETGIQKIVKEID CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAIHNDEIRTILVTKIISMLKERGPEILEVIFDFSEETMKKMAERPEEVQKLWEYTRNRL HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCE TYYLTEETNREELGQQLRVVLLEEMPKLANLLNEGLEEYLKTRSTLGKIGIGVKKIFSFN EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDAIRELLERFVKDPETSDQFMKMMDDMMAGLQERLNSKETQEFITGKISNWLEASGDYA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH RQNLLPSGIERLQAYLDDPNNWEEIEKNFFRAVDWVKKRLLEFMNSEEGKTYLKTNIEKF HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VHNINVTALVEERVMALDTDDLEKMILDNTGGNLVVIQFLGGILGMIAGLIQVHIYFAVP HHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH VGTLVLITYFAHYRNQKRFGEPKETV HHHHHHHHHHHHHHCHHHCCCCCCCC >Mature Secondary Structure MDVAKLDTWYRRLLVLSSVICGGFQVYYEGNVWINAIFVVLMAGMVGYYTNFLAIKMLFQ CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKHGKVLGWSGLVPKNKSKIAKSLGESIQSNLLHPDIILAYIYERNLVETGIQKIVKEID CCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAIHNDEIRTILVTKIISMLKERGPEILEVIFDFSEETMKKMAERPEEVQKLWEYTRNRL HHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCE TYYLTEETNREELGQQLRVVLLEEMPKLANLLNEGLEEYLKTRSTLGKIGIGVKKIFSFN EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDAIRELLERFVKDPETSDQFMKMMDDMMAGLQERLNSKETQEFITGKISNWLEASGDYA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH RQNLLPSGIERLQAYLDDPNNWEEIEKNFFRAVDWVKKRLLEFMNSEEGKTYLKTNIEKF HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VHNINVTALVEERVMALDTDDLEKMILDNTGGNLVVIQFLGGILGMIAGLIQVHIYFAVP HHHCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH VGTLVLITYFAHYRNQKRFGEPKETV HHHHHHHHHHHHHHCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]