| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220083
Identifier: 183220083
GI number: 183220083
Start: 673828
End: 674958
Strand: Reverse
Name: 183220083
Synonym: LEPBI_I0670
Alternate gene names: NA
Gene position: 674958-673828 (Counterclockwise)
Preceding gene: 183220084
Following gene: 183220082
Centisome position: 18.75
GC content: 44.39
Gene sequence:
>1131_bases ATGAAACAAAACCAAGAAATTGATTACCAACACCCATCCAAACAGGATCAAATTCGATTTTTCGCGTTTACCTTTGTTTT GGTGATTGGAATCACTCTTGGTTATTTTCTCGGCATCCCTCGGTATTATCTCGGATGGTTTTCCTTTGCGATTGCATCAT TCTCTGTGGCAGGAAATGATGCAGTCCAAACCATCGGAACTTTTATCGAAAGCAAAAAATCAGTCCATTGGTCCCAAAAG ATCCTCGTCTTCGGCGGTCTTTTATTTGTAGTCCACTTATTTGCATGGTTCATCCATGGGGGTGAAATCCACTTTCATCG ATTGGATTCCATTCCAGAAACCAAAGAATTCAATTTACTCCAATTACTCGCACCCGTATTACTTGTTGTGATCACAAGGC TCCGGGCTCCTGTCTCCACAACTTTTCTCGTCTTAGGTTTGTTTGGTGGCAAAAGCATCGACCAAATGTTAACCAAATCT TTTTTTGGTTACGGTTTAGCCTTCCTCGTTGCAATTTTTGTTTGGGCAATCCTTGTGAAAGTTGACCCACATGAATACCA TGAAGTCCATACGCCCGATCCAGTTTCCGAAAGGCGTTGGTCTCGTTTGCAGTGGTTCTCCACGATGTATCTCTGGGTGG CATGGTTATTCCAAGACACTGCCAATATCGCGGTTTTTTTACCAAGACAATTGGGACTGTTTGAATTTTTGATGGCCGTT TTTATCCTGATCTTTGCCCTTCTCATCATCATCCGCACGAATGGTGGCACCATCCAACAAGTGGTCTCCGAAAAATCGGA CATCCAATGGGCAAAAGCGGCTACCATCGTGGATTTGGTCTATGGAAGTTTGTTATTCTTTTTCCAGGCAATCAGTAACA TTCCCATGTCCACCACTTGGGCCTTCCTTGGGCTCCTTGCGGGCCGGGAGATCATTCTGAATGTGATTACCTACAAAGAC CTACCCTATCTGGATACCTTCCGTAAAGTGGGCAAAGATGTGGTCCTGGCCACAATTGGGATCGTAGTCTCCATCCTCAT ATTCTTCCTTTCCTACTTCCTATACCCAGAGCAAAGGCAATCCGCTCCCCTCGAATTCTGGAACTCAACAAATCAGGAAG ACTCCCTATAA
Upstream 100 bases:
>100_bases GAATTCCTGCACTGGATTCTGTTTTTGGTACTACAGACGTGTTCATTCTTTTCGACCGCAAGGAAATTACGGAGAGATAT GCAAAACACTATATGAATGC
Downstream 100 bases:
>100_bases TTCTCTTTGACAGTTCCCCTGATTGTCAGGGTAGTGTCATATATGAGATTGATTCTCACATACAGAGATTAGGAGCCATT ATGTCAGTTGCAATGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKQNQEIDYQHPSKQDQIRFFAFTFVLVIGITLGYFLGIPRYYLGWFSFAIASFSVAGNDAVQTIGTFIESKKSVHWSQK ILVFGGLLFVVHLFAWFIHGGEIHFHRLDSIPETKEFNLLQLLAPVLLVVITRLRAPVSTTFLVLGLFGGKSIDQMLTKS FFGYGLAFLVAIFVWAILVKVDPHEYHEVHTPDPVSERRWSRLQWFSTMYLWVAWLFQDTANIAVFLPRQLGLFEFLMAV FILIFALLIIIRTNGGTIQQVVSEKSDIQWAKAATIVDLVYGSLLFFFQAISNIPMSTTWAFLGLLAGREIILNVITYKD LPYLDTFRKVGKDVVLATIGIVVSILIFFLSYFLYPEQRQSAPLEFWNSTNQEDSL
Sequences:
>Translated_376_residues MKQNQEIDYQHPSKQDQIRFFAFTFVLVIGITLGYFLGIPRYYLGWFSFAIASFSVAGNDAVQTIGTFIESKKSVHWSQK ILVFGGLLFVVHLFAWFIHGGEIHFHRLDSIPETKEFNLLQLLAPVLLVVITRLRAPVSTTFLVLGLFGGKSIDQMLTKS FFGYGLAFLVAIFVWAILVKVDPHEYHEVHTPDPVSERRWSRLQWFSTMYLWVAWLFQDTANIAVFLPRQLGLFEFLMAV FILIFALLIIIRTNGGTIQQVVSEKSDIQWAKAATIVDLVYGSLLFFFQAISNIPMSTTWAFLGLLAGREIILNVITYKD LPYLDTFRKVGKDVVLATIGIVVSILIFFLSYFLYPEQRQSAPLEFWNSTNQEDSL >Mature_376_residues MKQNQEIDYQHPSKQDQIRFFAFTFVLVIGITLGYFLGIPRYYLGWFSFAIASFSVAGNDAVQTIGTFIESKKSVHWSQK ILVFGGLLFVVHLFAWFIHGGEIHFHRLDSIPETKEFNLLQLLAPVLLVVITRLRAPVSTTFLVLGLFGGKSIDQMLTKS FFGYGLAFLVAIFVWAILVKVDPHEYHEVHTPDPVSERRWSRLQWFSTMYLWVAWLFQDTANIAVFLPRQLGLFEFLMAV FILIFALLIIIRTNGGTIQQVVSEKSDIQWAKAATIVDLVYGSLLFFFQAISNIPMSTTWAFLGLLAGREIILNVITYKD LPYLDTFRKVGKDVVLATIGIVVSILIFFLSYFLYPEQRQSAPLEFWNSTNQEDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43011; Mature: 43011
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNQEIDYQHPSKQDQIRFFAFTFVLVIGITLGYFLGIPRYYLGWFSFAIASFSVAGND CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH AVQTIGTFIESKKSVHWSQKILVFGGLLFVVHLFAWFIHGGEIHFHRLDSIPETKEFNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH QLLAPVLLVVITRLRAPVSTTFLVLGLFGGKSIDQMLTKSFFGYGLAFLVAIFVWAILVK HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPHEYHEVHTPDPVSERRWSRLQWFSTMYLWVAWLFQDTANIAVFLPRQLGLFEFLMAV CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHH FILIFALLIIIRTNGGTIQQVVSEKSDIQWAKAATIVDLVYGSLLFFFQAISNIPMSTTW HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AFLGLLAGREIILNVITYKDLPYLDTFRKVGKDVVLATIGIVVSILIFFLSYFLYPEQRQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC SAPLEFWNSTNQEDSL CCCHHHHCCCCCCCCC >Mature Secondary Structure MKQNQEIDYQHPSKQDQIRFFAFTFVLVIGITLGYFLGIPRYYLGWFSFAIASFSVAGND CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH AVQTIGTFIESKKSVHWSQKILVFGGLLFVVHLFAWFIHGGEIHFHRLDSIPETKEFNLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH QLLAPVLLVVITRLRAPVSTTFLVLGLFGGKSIDQMLTKSFFGYGLAFLVAIFVWAILVK HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPHEYHEVHTPDPVSERRWSRLQWFSTMYLWVAWLFQDTANIAVFLPRQLGLFEFLMAV CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHH FILIFALLIIIRTNGGTIQQVVSEKSDIQWAKAATIVDLVYGSLLFFFQAISNIPMSTTW HHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AFLGLLAGREIILNVITYKDLPYLDTFRKVGKDVVLATIGIVVSILIFFLSYFLYPEQRQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC SAPLEFWNSTNQEDSL CCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA