| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220081
Identifier: 183220081
GI number: 183220081
Start: 671810
End: 673063
Strand: Reverse
Name: 183220081
Synonym: LEPBI_I0668
Alternate gene names: NA
Gene position: 673063-671810 (Counterclockwise)
Preceding gene: 183220082
Following gene: 183220080
Centisome position: 18.7
GC content: 38.36
Gene sequence:
>1254_bases TTGGGATTCCCGTATACACTCGTAACACTTGTATTTTTATCGATGTTGCCGGTCACGATGATTGTGCCGGTAGTCAAAGA CATTGTAAAGGATCGTTTGTTTGGATCCAACTGGGAAGTGGCTTTTTTCACAAGCATACCCATGTTAGGTTCCTTTTTGT TTGCTCCTGTTGCGGGAATCATTTCGGATCGTTTCAAAAACAGAAAGTTCTTCATCAGTTTTTTTTGTTTTTTAGATGCA GGACTTTTTTACCTCTTAACTGTCGCCACTGACATGGGATTATTTTTATTCCTACGATTTTTGGAAGGTGCTGCGCATAT CTTTATCATCGGGTTACTATTAAGTTCCGCTGCTGACCAAGAGAATGATCCCAAAAACAAACGATATTATGGCAAAGGGA TCCTTATGGGTATCACAGGGATGTTTTTATCCTTGGGTGGTGCTTTGGGACTTCCATTAGGAATCCTCGGAAGGAGTAAT CCTTTATTGCCCTTTTATGTTGGATCGAGCATTCTTATTTTTGTCGGGATCATGAGTTTTCTTTTGTTAAAAGACAAAGG CATTCACACTGTCAAAGATTTTAAATTGAGTGATTTAAAATTGGCAATTTTTGAAAATCCCTTTCTGTTTGTGCCTTTTA TGTTTAATTTTATCGATCGATTTACTGTTGGGTTTATCATTTCCTCGTTTAACATTCATTTACGAGAAACTTTGGCCTTC CACCCAGGAATGCTTGGAGTTTTCCTAGGACTTGTGCTCCTACCAATGAGTTTGTTGTCTTACCCATCTGCATTACTCTC TCGCAAAACAGGCGTTCTTCCTCTAGTATTAGTTGGATCCACGGTTTATGGAATCTTTTTGGGATTGTCTGGAACAACCA ATGATTACTCGTATTTATTTTTATTTCTATTGATCTGTGGGATTGGAGCGGGTGTGATGTTCGTTCCTTCCATGATGTTA GCAAGTAAGATGTCAAAACCTGGACTGACTGCCACTACGATGTCTGCCTTCACTGGTGTGGGTTCACTTGGATTTATGTT GGGCCCAATCGTTTCTGTCCAAATGCAAACAGTATTCGAATCTTTACTTCCGAAAGAATATAGTTTTTCGGCACTTTCTT TCTTTTTTGGATTTTTAGAGATAGGACTTGTTTTTATGACAATTCCATTTTTTAAAAAGATTTTAAGCAAAATGAACCGA ATCGACGAAGAAAGAGAAAAGATTACACTTGCCAATCCAGATCCTATCCTGTAA
Upstream 100 bases:
>100_bases GTTTGATTTAAACAAATTTTTGTTCATCGAACTCGATTCCGATTTAAAAGAAAATATCGGAATGGAACGTTACCAAACTC TTCTGCCAGCAGGTTAATTT
Downstream 100 bases:
>100_bases AATTTCTCCTAATCCATCTTAGGAAAGGTTTATGTTCAAAAGATTACTGATTCTTAGCACACTCGCTTCGGTTCTATTCC TTGTGTCTTGTTCCTCAGGA
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Permease
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MGFPYTLVTLVFLSMLPVTMIVPVVKDIVKDRLFGSNWEVAFFTSIPMLGSFLFAPVAGIISDRFKNRKFFISFFCFLDA GLFYLLTVATDMGLFLFLRFLEGAAHIFIIGLLLSSAADQENDPKNKRYYGKGILMGITGMFLSLGGALGLPLGILGRSN PLLPFYVGSSILIFVGIMSFLLLKDKGIHTVKDFKLSDLKLAIFENPFLFVPFMFNFIDRFTVGFIISSFNIHLRETLAF HPGMLGVFLGLVLLPMSLLSYPSALLSRKTGVLPLVLVGSTVYGIFLGLSGTTNDYSYLFLFLLICGIGAGVMFVPSMML ASKMSKPGLTATTMSAFTGVGSLGFMLGPIVSVQMQTVFESLLPKEYSFSALSFFFGFLEIGLVFMTIPFFKKILSKMNR IDEEREKITLANPDPIL
Sequences:
>Translated_417_residues MGFPYTLVTLVFLSMLPVTMIVPVVKDIVKDRLFGSNWEVAFFTSIPMLGSFLFAPVAGIISDRFKNRKFFISFFCFLDA GLFYLLTVATDMGLFLFLRFLEGAAHIFIIGLLLSSAADQENDPKNKRYYGKGILMGITGMFLSLGGALGLPLGILGRSN PLLPFYVGSSILIFVGIMSFLLLKDKGIHTVKDFKLSDLKLAIFENPFLFVPFMFNFIDRFTVGFIISSFNIHLRETLAF HPGMLGVFLGLVLLPMSLLSYPSALLSRKTGVLPLVLVGSTVYGIFLGLSGTTNDYSYLFLFLLICGIGAGVMFVPSMML ASKMSKPGLTATTMSAFTGVGSLGFMLGPIVSVQMQTVFESLLPKEYSFSALSFFFGFLEIGLVFMTIPFFKKILSKMNR IDEEREKITLANPDPIL >Mature_416_residues GFPYTLVTLVFLSMLPVTMIVPVVKDIVKDRLFGSNWEVAFFTSIPMLGSFLFAPVAGIISDRFKNRKFFISFFCFLDAG LFYLLTVATDMGLFLFLRFLEGAAHIFIIGLLLSSAADQENDPKNKRYYGKGILMGITGMFLSLGGALGLPLGILGRSNP LLPFYVGSSILIFVGIMSFLLLKDKGIHTVKDFKLSDLKLAIFENPFLFVPFMFNFIDRFTVGFIISSFNIHLRETLAFH PGMLGVFLGLVLLPMSLLSYPSALLSRKTGVLPLVLVGSTVYGIFLGLSGTTNDYSYLFLFLLICGIGAGVMFVPSMMLA SKMSKPGLTATTMSAFTGVGSLGFMLGPIVSVQMQTVFESLLPKEYSFSALSFFFGFLEIGLVFMTIPFFKKILSKMNRI DEEREKITLANPDPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46041; Mature: 45910
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFPYTLVTLVFLSMLPVTMIVPVVKDIVKDRLFGSNWEVAFFTSIPMLGSFLFAPVAGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH ISDRFKNRKFFISFFCFLDAGLFYLLTVATDMGLFLFLRFLEGAAHIFIIGLLLSSAADQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC ENDPKNKRYYGKGILMGITGMFLSLGGALGLPLGILGRSNPLLPFYVGSSILIFVGIMSF CCCCCCCCEECCCHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHH LLLKDKGIHTVKDFKLSDLKLAIFENPFLFVPFMFNFIDRFTVGFIISSFNIHLRETLAF HHHCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH HPGMLGVFLGLVLLPMSLLSYPSALLSRKTGVLPLVLVGSTVYGIFLGLSGTTNDYSYLF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH LFLLICGIGAGVMFVPSMMLASKMSKPGLTATTMSAFTGVGSLGFMLGPIVSVQMQTVFE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SLLPKEYSFSALSFFFGFLEIGLVFMTIPFFKKILSKMNRIDEEREKITLANPDPIL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCC >Mature Secondary Structure GFPYTLVTLVFLSMLPVTMIVPVVKDIVKDRLFGSNWEVAFFTSIPMLGSFLFAPVAGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHH ISDRFKNRKFFISFFCFLDAGLFYLLTVATDMGLFLFLRFLEGAAHIFIIGLLLSSAADQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC ENDPKNKRYYGKGILMGITGMFLSLGGALGLPLGILGRSNPLLPFYVGSSILIFVGIMSF CCCCCCCCEECCCHHHHHHHHHHHHCCHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHH LLLKDKGIHTVKDFKLSDLKLAIFENPFLFVPFMFNFIDRFTVGFIISSFNIHLRETLAF HHHCCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH HPGMLGVFLGLVLLPMSLLSYPSALLSRKTGVLPLVLVGSTVYGIFLGLSGTTNDYSYLF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH LFLLICGIGAGVMFVPSMMLASKMSKPGLTATTMSAFTGVGSLGFMLGPIVSVQMQTVFE HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SLLPKEYSFSALSFFFGFLEIGLVFMTIPFFKKILSKMNRIDEEREKITLANPDPIL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA