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The map label for this gene is 183220072

Identifier: 183220072

GI number: 183220072

Start: 663605

End: 664246

Strand: Reverse

Name: 183220072

Synonym: LEPBI_I0659

Alternate gene names: NA

Gene position: 664246-663605 (Counterclockwise)

Preceding gene: 183220075

Following gene: 183220071

Centisome position: 18.45

GC content: 45.64

Gene sequence:

>642_bases
ATGAAATTATCGATTAATATGGCGATGACCTTGGATGGAAAGGTAGTTCGCCCCGATGGCCGTTGGTATGGCCTCACTTC
CTCGGAAGACAAAACCCAAATGGATGTCTACCGCTCTCAATCCGATGCCGTTCTCATTGGCAAAAACTCCATCCTAAATG
ACAACCCCATAGTCAAAATCCGGGCCGTGCCCAATGCTCTGAACCCAAGGCCCGTCATCCTAGTCCGAAAAGGCACCCTT
CCACCCGACAAACATGTTTTTGAGGAATCCGATCATATCCCCCTCATCATTTGCACCAAATCCAATTTAAAAGAGATCAA
AACCAGTTTAGAGAATAAGGCAGAAATCTTTGCTTTGGACTCCGATGACATTGACCCCAAAAAAGTGACGGGGATTCTCA
AACGAAAGGGCTACAAAAATGTCCTACTCGAGGGTGGACCAAAACTCAATTTTTCCTTCTTAGAAGCGGACCTGGTCGAC
CGTATTTATATCACCGTTGTCCCCTACATCATCGGAAAAACGGGTCTTGCCGGCATCGCGGATCGGAATTCAGAACTCCC
AGGCTTTGACAAACAAAACTGGACTCTCAAACAACATTTTACCAAAGGAAACGAGATCTTTCTCGTGTACGAAAAATCAT
AA

Upstream 100 bases:

>100_bases
GAGAAACAACAAGAGCCTCTACCGGCTGCGGGACTTGCTCCATGCAAGTCTACCACATCCTCCAGCGCGAATTGCAGAAT
CTCTCTCGGAGGAAAATTTC

Downstream 100 bases:

>100_bases
GAAAAATTGGAATTTTTGGATTGACCTGTTTCCCTATCATTAAATAGTTTGATATTAAACTATTCAGCAATAAGAGGTTC
TATGTTTTACAAATTACTCG

Product: putative riboflavin biosynthesis protein RibD

Products: NA

Alternate protein names: HTP reductase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKLSINMAMTLDGKVVRPDGRWYGLTSSEDKTQMDVYRSQSDAVLIGKNSILNDNPIVKIRAVPNALNPRPVILVRKGTL
PPDKHVFEESDHIPLIICTKSNLKEIKTSLENKAEIFALDSDDIDPKKVTGILKRKGYKNVLLEGGPKLNFSFLEADLVD
RIYITVVPYIIGKTGLAGIADRNSELPGFDKQNWTLKQHFTKGNEIFLVYEKS

Sequences:

>Translated_213_residues
MKLSINMAMTLDGKVVRPDGRWYGLTSSEDKTQMDVYRSQSDAVLIGKNSILNDNPIVKIRAVPNALNPRPVILVRKGTL
PPDKHVFEESDHIPLIICTKSNLKEIKTSLENKAEIFALDSDDIDPKKVTGILKRKGYKNVLLEGGPKLNFSFLEADLVD
RIYITVVPYIIGKTGLAGIADRNSELPGFDKQNWTLKQHFTKGNEIFLVYEKS
>Mature_213_residues
MKLSINMAMTLDGKVVRPDGRWYGLTSSEDKTQMDVYRSQSDAVLIGKNSILNDNPIVKIRAVPNALNPRPVILVRKGTL
PPDKHVFEESDHIPLIICTKSNLKEIKTSLENKAEIFALDSDDIDPKKVTGILKRKGYKNVLLEGGPKLNFSFLEADLVD
RIYITVVPYIIGKTGLAGIADRNSELPGFDKQNWTLKQHFTKGNEIFLVYEKS

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HTP reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006401
- InterPro:   IPR011549
- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: =1.1.1.193 [H]

Molecular weight: Translated: 23897; Mature: 23897

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSINMAMTLDGKVVRPDGRWYGLTSSEDKTQMDVYRSQSDAVLIGKNSILNDNPIVKI
CEEEEEEEEEECCEEECCCCCEEECCCCCCCHHHHHEECCCCEEEEECCCCCCCCCEEEE
RAVPNALNPRPVILVRKGTLPPDKHVFEESDHIPLIICTKSNLKEIKTSLENKAEIFALD
EECCCCCCCCCEEEEECCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEEC
SDDIDPKKVTGILKRKGYKNVLLEGGPKLNFSFLEADLVDRIYITVVPYIIGKTGLAGIA
CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHEEEEEEHHHHHCCCCCCCCC
DRNSELPGFDKQNWTLKQHFTKGNEIFLVYEKS
CCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MKLSINMAMTLDGKVVRPDGRWYGLTSSEDKTQMDVYRSQSDAVLIGKNSILNDNPIVKI
CEEEEEEEEEECCEEECCCCCEEECCCCCCCHHHHHEECCCCEEEEECCCCCCCCCEEEE
RAVPNALNPRPVILVRKGTLPPDKHVFEESDHIPLIICTKSNLKEIKTSLENKAEIFALD
EECCCCCCCCCEEEEECCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEEC
SDDIDPKKVTGILKRKGYKNVLLEGGPKLNFSFLEADLVDRIYITVVPYIIGKTGLAGIA
CCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHEEEEEEHHHHHCCCCCCCCC
DRNSELPGFDKQNWTLKQHFTKGNEIFLVYEKS
CCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]