| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220042
Identifier: 183220042
GI number: 183220042
Start: 631601
End: 632119
Strand: Reverse
Name: 183220042
Synonym: LEPBI_I0628
Alternate gene names: NA
Gene position: 632119-631601 (Counterclockwise)
Preceding gene: 183220044
Following gene: 183220041
Centisome position: 17.56
GC content: 37.19
Gene sequence:
>519_bases ATGGAAACTCGTAAAGTCCGTATCCTATTTTTAGTATTTTATGTTTTATCTCTACTTGTTTGGATCATTGAGGAAATTTA TACTCTCTCAAAACCTCCCGAATACTTTGACAGGTTCCGAGTTCTCATTGCAACGATTGAATCATTCATAGCCCTATCTT CTTTTCTGGTTGTTTTTATCTTGTACAAAGAATTGAAAAAAGAAGCGGTCGAAAACAGACAGGCAAAAACACAAATCCAT GATTTAAAACGAACCAATCGAATCCTAATCAATCCAGAAAAAGGATTTTGGGCGGAAGCAAAAGCGCAAATGACAGATTG GAATCTAACCGATGTCGAAACAGAAATTGCTATTCTTTTGTTAAGAGGTTTTTCACAAAAACAAATCGCGGCTGTCAGGA AAAAAAGCCTTCGAACCATTGAAAACCAAACAGCATCGATCTATGAAAAGTCTTCCATGCGAGGAAAACTAGAGTTTATC TCTTTTTTTCTCACGCCACTCCTGCCTGAAGAGGACTGA
Upstream 100 bases:
>100_bases ACACTGGTCCAATTTCCAATAGAGGAATACCGCAAATGTGGGAATTACCTATGAAACATACTTGCTTCTCCAAATAAGAA GTTTGAAAATGAAATAGAAG
Downstream 100 bases:
>100_bases ACAAAAAACCTTGACCAAAGCCAAATGATTTGGTTATTTTAAGTTTGTTTTATGAAAACTCTACAAACTGTCTTTCTCAC ATTGATTCTAACATTATGTA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Response Regulator Receiver Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFIALSSFLVVFILYKELKKEAVENRQAKTQIH DLKRTNRILINPEKGFWAEAKAQMTDWNLTDVETEIAILLLRGFSQKQIAAVRKKSLRTIENQTASIYEKSSMRGKLEFI SFFLTPLLPEED
Sequences:
>Translated_172_residues METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFIALSSFLVVFILYKELKKEAVENRQAKTQIH DLKRTNRILINPEKGFWAEAKAQMTDWNLTDVETEIAILLLRGFSQKQIAAVRKKSLRTIENQTASIYEKSSMRGKLEFI SFFLTPLLPEED >Mature_172_residues METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFIALSSFLVVFILYKELKKEAVENRQAKTQIH DLKRTNRILINPEKGFWAEAKAQMTDWNLTDVETEIAILLLRGFSQKQIAAVRKKSLRTIENQTASIYEKSSMRGKLEFI SFFLTPLLPEED
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20225; Mature: 20225
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFIALSSFLVVFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKELKKEAVENRQAKTQIHDLKRTNRILINPEKGFWAEAKAQMTDWNLTDVETEIAILL HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHH LRGFSQKQIAAVRKKSLRTIENQTASIYEKSSMRGKLEFISFFLTPLLPEED HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure METRKVRILFLVFYVLSLLVWIIEEIYTLSKPPEYFDRFRVLIATIESFIALSSFLVVFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYKELKKEAVENRQAKTQIHDLKRTNRILINPEKGFWAEAKAQMTDWNLTDVETEIAILL HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHH LRGFSQKQIAAVRKKSLRTIENQTASIYEKSSMRGKLEFISFFLTPLLPEED HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA