| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220005
Identifier: 183220005
GI number: 183220005
Start: 589339
End: 589776
Strand: Reverse
Name: 183220005
Synonym: LEPBI_I0587
Alternate gene names: NA
Gene position: 589776-589339 (Counterclockwise)
Preceding gene: 183220007
Following gene: 183220004
Centisome position: 16.38
GC content: 42.92
Gene sequence:
>438_bases GTGTTCTGGTTTGTTTTTTTGATCTTATGTCTCTTGGACTCGATTCTATCTCTCACTTTATTATTTTCGGATTTGGCCTC CCTCATTCTAGAGTGCCCAAATAAAAATTGGATTGAATTTGTTCGGGCATCACTTTCAATCTTGAACATGCCCGATTTTG ATCGTATTGATCTTATGAATTATGCCATGTATGGAAATGATTTTGATCCCCAATGGGATGAAATCCGCGCCTTTATCAAA TCCAATGCTTCTGCCCAAAAAGAATTGGAGGAAATCAAACGCACCGTTCCAAGCCCCCACGTAGGGAAAAGACGCATGCC AAATGCTCCTTCCAGTGACCCGAGAGACATGAGTGGGGAGAACCCAAATGCGGAACCAAGAAAACCAAGCAGTGGGTCGC CCGACAAATCTTGGTGGCAAAAAATCTTAGGAGATTGA
Upstream 100 bases:
>100_bases CCCCTCGTTCGGTTCGCAAAACAAATCTTCACATAAATGGAAAATTTTCTCCTTATTCGGTTGGACCGGAAATGGAATTA CGTTTTTTGGCAATGGATTT
Downstream 100 bases:
>100_bases AATGGAAAATACCGTAGACCAAGTCAAAAAAAACGTTGAGAACATCAAAAAGTTTGTGACTCCGTTTTTTAATTTGGCTG TCAGCACAACTGTCTACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MFWFVFLILCLLDSILSLTLLFSDLASLILECPNKNWIEFVRASLSILNMPDFDRIDLMNYAMYGNDFDPQWDEIRAFIK SNASAQKELEEIKRTVPSPHVGKRRMPNAPSSDPRDMSGENPNAEPRKPSSGSPDKSWWQKILGD
Sequences:
>Translated_145_residues MFWFVFLILCLLDSILSLTLLFSDLASLILECPNKNWIEFVRASLSILNMPDFDRIDLMNYAMYGNDFDPQWDEIRAFIK SNASAQKELEEIKRTVPSPHVGKRRMPNAPSSDPRDMSGENPNAEPRKPSSGSPDKSWWQKILGD >Mature_145_residues MFWFVFLILCLLDSILSLTLLFSDLASLILECPNKNWIEFVRASLSILNMPDFDRIDLMNYAMYGNDFDPQWDEIRAFIK SNASAQKELEEIKRTVPSPHVGKRRMPNAPSSDPRDMSGENPNAEPRKPSSGSPDKSWWQKILGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16637; Mature: 16637
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWFVFLILCLLDSILSLTLLFSDLASLILECPNKNWIEFVRASLSILNMPDFDRIDLMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHH YAMYGNDFDPQWDEIRAFIKSNASAQKELEEIKRTVPSPHVGKRRMPNAPSSDPRDMSGE HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NPNAEPRKPSSGSPDKSWWQKILGD CCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MFWFVFLILCLLDSILSLTLLFSDLASLILECPNKNWIEFVRASLSILNMPDFDRIDLMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHH YAMYGNDFDPQWDEIRAFIKSNASAQKELEEIKRTVPSPHVGKRRMPNAPSSDPRDMSGE HHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NPNAEPRKPSSGSPDKSWWQKILGD CCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA