| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219972
Identifier: 183219972
GI number: 183219972
Start: 552436
End: 553818
Strand: Reverse
Name: 183219972
Synonym: LEPBI_I0554
Alternate gene names: NA
Gene position: 553818-552436 (Counterclockwise)
Preceding gene: 183219974
Following gene: 183219971
Centisome position: 15.39
GC content: 37.38
Gene sequence:
>1383_bases GTGTCAATTCTTTTGTACATGAATTCTGAGACGGCCATATTATTTACTCAATGTTTACAAAATGATTTTGCATCCCTTTT AGATCAATATGATCCCCTTCCCAATTCCTTACACATTGGGTATGCAGAAGCAAATCGTTTGCTCGGTGAAATGGTAGAAG ATGGACCTGTATTTTCACTGATGGATTGGGCTTATGAGTCTGATCCCAGCCGTTTAAAATTAATTCACATTCGTGATTGG CATGATCTCAATTCAAAATCACAAGAAGACCATTTGATTCAGTTTGGTCCTCATTGTATCCAAGATACAAAAGGGGCAGA GTTTGTGTTTCAAAATTGGATCGAAAGAGATCCGAAACGAGCCGAGATCATAAATGCTTCTGGTTTGAATGACTTTGTAG AAACAAATTTAGAATCAATTTTAAAGCCCTATCAAGGCAAACCATTGAAAGTGGGGATCACTGGTGTATGGACGGAAGCA AAAGTTACGTTTTTGTGTTATGATCTAAAAACGAGATACCCTGAATTTGAATTGGCTGTCTGTTCTGCCCTGACTGCCAG TTCTTCGCTTTCCATGCATTTCATCGCCTTGGACCAATTGAAACAAATTTTAGGTGTCAAAGTATTCTCTTCGATCGGTG CCTTCACGGAATATTTAACCGGGGACCAACCAAATTTGGTGAAACGGATTTCCACCAATGCAAGGATTGCAAGTGATAAG CTGAAATTAGATCCTAAGTATCCAATCTCTGAAATTGACAAACAAATTTTACTCTATTTATTCAGAGATTGCAAAGAAGT AGAATTTAAAACATTAGATGGTGGATTTTCTGGAAACGTAGTCTTAAAATCCAAATCCATAGACAATCTAGGGCATTCAC AAGTTCCATGTGTTGTGAAAATTGGAAATCGTGATCTCATTGCAAAAGAAAGGACATCCTTTGAAAGGATCCAAGAAGTG TTAGGGAATAATGCACCTTCGATTGTGGATTTTTGTGAATTAAATGACAGAGGTGCCATTAAATACCGTTATGCGGCAAT GTTAGATGGGAATGTAAAAACCTTTCAAAAAGTATATGGTGTTATGGCAGATGGATCAGGCCTTGATCGTATCATTGATG TTGTGTTTGGTGAACAGTTGGGTCGATTATTTGAAGCAGCCTCAACAGAAAAACTCAATTTGTTAGAATATTACGACTTC CAATCAAAATATGCAAAATCGGTTCGGTCAAGAGTGGAATCGATATTAGGTGGACCACAACCAAAAGAAACCATCTCCAT ATATCCAGGTTTTGAAACCAATAATCCTTGTATTTTTTATGAAAAAGACCTGATCCAACTGAAAGAATACAATCACACAC AATACTTCCTTTGTGCATGGTGA
Upstream 100 bases:
>100_bases AGAAAGTCCAACCGTCAAAACCATCGTCAATAAAATCGGAATCAATTGTTTCATCGTCCCTCCAAAATTTAAGAAATAAA TTCTCGATTTATTTGGAAAG
Downstream 100 bases:
>100_bases CTTAAATGGAGCCAATATCATCATTGATGCCCAAGACAATGTCTGGATGATCGACTTTTTCCATACACACCGTGGTCATA TCATCCGAGATTTATTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSILLYMNSETAILFTQCLQNDFASLLDQYDPLPNSLHIGYAEANRLLGEMVEDGPVFSLMDWAYESDPSRLKLIHIRDW HDLNSKSQEDHLIQFGPHCIQDTKGAEFVFQNWIERDPKRAEIINASGLNDFVETNLESILKPYQGKPLKVGITGVWTEA KVTFLCYDLKTRYPEFELAVCSALTASSSLSMHFIALDQLKQILGVKVFSSIGAFTEYLTGDQPNLVKRISTNARIASDK LKLDPKYPISEIDKQILLYLFRDCKEVEFKTLDGGFSGNVVLKSKSIDNLGHSQVPCVVKIGNRDLIAKERTSFERIQEV LGNNAPSIVDFCELNDRGAIKYRYAAMLDGNVKTFQKVYGVMADGSGLDRIIDVVFGEQLGRLFEAASTEKLNLLEYYDF QSKYAKSVRSRVESILGGPQPKETISIYPGFETNNPCIFYEKDLIQLKEYNHTQYFLCAW
Sequences:
>Translated_460_residues MSILLYMNSETAILFTQCLQNDFASLLDQYDPLPNSLHIGYAEANRLLGEMVEDGPVFSLMDWAYESDPSRLKLIHIRDW HDLNSKSQEDHLIQFGPHCIQDTKGAEFVFQNWIERDPKRAEIINASGLNDFVETNLESILKPYQGKPLKVGITGVWTEA KVTFLCYDLKTRYPEFELAVCSALTASSSLSMHFIALDQLKQILGVKVFSSIGAFTEYLTGDQPNLVKRISTNARIASDK LKLDPKYPISEIDKQILLYLFRDCKEVEFKTLDGGFSGNVVLKSKSIDNLGHSQVPCVVKIGNRDLIAKERTSFERIQEV LGNNAPSIVDFCELNDRGAIKYRYAAMLDGNVKTFQKVYGVMADGSGLDRIIDVVFGEQLGRLFEAASTEKLNLLEYYDF QSKYAKSVRSRVESILGGPQPKETISIYPGFETNNPCIFYEKDLIQLKEYNHTQYFLCAW >Mature_459_residues SILLYMNSETAILFTQCLQNDFASLLDQYDPLPNSLHIGYAEANRLLGEMVEDGPVFSLMDWAYESDPSRLKLIHIRDWH DLNSKSQEDHLIQFGPHCIQDTKGAEFVFQNWIERDPKRAEIINASGLNDFVETNLESILKPYQGKPLKVGITGVWTEAK VTFLCYDLKTRYPEFELAVCSALTASSSLSMHFIALDQLKQILGVKVFSSIGAFTEYLTGDQPNLVKRISTNARIASDKL KLDPKYPISEIDKQILLYLFRDCKEVEFKTLDGGFSGNVVLKSKSIDNLGHSQVPCVVKIGNRDLIAKERTSFERIQEVL GNNAPSIVDFCELNDRGAIKYRYAAMLDGNVKTFQKVYGVMADGSGLDRIIDVVFGEQLGRLFEAASTEKLNLLEYYDFQ SKYAKSVRSRVESILGGPQPKETISIYPGFETNNPCIFYEKDLIQLKEYNHTQYFLCAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52160; Mature: 52029
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILLYMNSETAILFTQCLQNDFASLLDQYDPLPNSLHIGYAEANRLLGEMVEDGPVFSL CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEH MDWAYESDPSRLKLIHIRDWHDLNSKSQEDHLIQFGPHCIQDTKGAEFVFQNWIERDPKR HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCH AEIINASGLNDFVETNLESILKPYQGKPLKVGITGVWTEAKVTFLCYDLKTRYPEFELAV HEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEHHCCCCCHHHHH CSALTASSSLSMHFIALDQLKQILGVKVFSSIGAFTEYLTGDQPNLVKRISTNARIASDK HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCC LKLDPKYPISEIDKQILLYLFRDCKEVEFKTLDGGFSGNVVLKSKSIDNLGHSQVPCVVK EECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE IGNRDLIAKERTSFERIQEVLGNNAPSIVDFCELNDRGAIKYRYAAMLDGNVKTFQKVYG ECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHEECCCCCCEEEEEEEEECCCHHHHHHHHH VMADGSGLDRIIDVVFGEQLGRLFEAASTEKLNLLEYYDFQSKYAKSVRSRVESILGGPQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC PKETISIYPGFETNNPCIFYEKDLIQLKEYNHTQYFLCAW CCCEEEEECCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure SILLYMNSETAILFTQCLQNDFASLLDQYDPLPNSLHIGYAEANRLLGEMVEDGPVFSL EEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEH MDWAYESDPSRLKLIHIRDWHDLNSKSQEDHLIQFGPHCIQDTKGAEFVFQNWIERDPKR HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHCCCCH AEIINASGLNDFVETNLESILKPYQGKPLKVGITGVWTEAKVTFLCYDLKTRYPEFELAV HEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEHHCCCCCHHHHH CSALTASSSLSMHFIALDQLKQILGVKVFSSIGAFTEYLTGDQPNLVKRISTNARIASDK HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCC LKLDPKYPISEIDKQILLYLFRDCKEVEFKTLDGGFSGNVVLKSKSIDNLGHSQVPCVVK EECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEE IGNRDLIAKERTSFERIQEVLGNNAPSIVDFCELNDRGAIKYRYAAMLDGNVKTFQKVYG ECCCCCCHHHHHHHHHHHHHHCCCCCCEEEHEECCCCCCEEEEEEEEECCCHHHHHHHHH VMADGSGLDRIIDVVFGEQLGRLFEAASTEKLNLLEYYDFQSKYAKSVRSRVESILGGPQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCC PKETISIYPGFETNNPCIFYEKDLIQLKEYNHTQYFLCAW CCCEEEEECCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA