| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219968
Identifier: 183219968
GI number: 183219968
Start: 548418
End: 549296
Strand: Reverse
Name: 183219968
Synonym: LEPBI_I0550
Alternate gene names: NA
Gene position: 549296-548418 (Counterclockwise)
Preceding gene: 183219971
Following gene: 183219967
Centisome position: 15.26
GC content: 44.03
Gene sequence:
>879_bases ATGTCCCAAGCCGCCGCCCAGTCAAAAAAAGTATCTTTTCGTGCCAAAGAGTCTACAGCTTGCCCAATTTGTGATGAAAA TCACCAAAAGGAGCAGATGTTCCAAGGTGGCGGTCGTCTCATCGCTGGGAAATTAGCCCAAGATTTACGTCGTTTGTACG AAAAAAATAGAAAATTTGGGCGTGTGAGCCCCCTGGATTATGTCATGACAGTCTGTCCGAGGTGTTTGTATTCTTCCTTT CCTAAAGACTGGAATGCACTGAACCCCGCTGACAACGAAGCCATTCGTATGGCAACAGATGCTCGTAGAAGTTATATTGA AAAAATCCTTGGTCCACTCGATTTCACTCAGGACCGCCAAATTGTGTTAGGTGCAGCCTCGTATCTACTTGGAATGGATT GTTACCAATTGCGTGGTGTCAGTGTTGCCCCAACTCCGAAAAAAGCAGTTTGTGCGATACGAGCCGCTTGGTATTTCTCT GACTTACATGAAGAGTTCCCACATATCGGGTATGATAAAATCCGAGACCTACTCTACCAAAAAGCCGCTGTCATTTATGG TTATACATTAGAACTCATGCAAAATGGAAACGAACCTGTGGACCAAGCCGCAGGGATGCTTGGACCAGACACAGATAATA ACTGGGGATTTGATGGTGTCATTTATTTGAATGCTTTCCTAACAAAAAAATTCAAAGACCAAATGGCTCCCAAACCAGAG GACCAAGTTTTACTTTTATCTCGTGCGAAACGAACACTTGCTAGATTGTATGGTTCAGGAAAGGCAAGTAAAGGGAAACC AGGCCCTATTGTGGAAATGACACGTGAGTTATACGACGAATACAATGCCATTTTAGAAGCAATGGGAGGCGAGAAGTAA
Upstream 100 bases:
>100_bases CAAGTAATTTCAGGGTGTCCCCTGTGAGTATTATCGGAGATTTATGATATTGGATTGACAGATTGTATTTTAAAATTGAG CCTTTTCCTAGATTTTTCCT
Downstream 100 bases:
>100_bases GGGTTTGCCCAATTACGCACTTCTTGTCGAATATGATGGCACTCATTTTAATGGGTGGCAAAAACAAAAGAACCTTCCGA CTGTCCAATCTTCGATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSQAAAQSKKVSFRAKESTACPICDENHQKEQMFQGGGRLIAGKLAQDLRRLYEKNRKFGRVSPLDYVMTVCPRCLYSSF PKDWNALNPADNEAIRMATDARRSYIEKILGPLDFTQDRQIVLGAASYLLGMDCYQLRGVSVAPTPKKAVCAIRAAWYFS DLHEEFPHIGYDKIRDLLYQKAAVIYGYTLELMQNGNEPVDQAAGMLGPDTDNNWGFDGVIYLNAFLTKKFKDQMAPKPE DQVLLLSRAKRTLARLYGSGKASKGKPGPIVEMTRELYDEYNAILEAMGGEK
Sequences:
>Translated_292_residues MSQAAAQSKKVSFRAKESTACPICDENHQKEQMFQGGGRLIAGKLAQDLRRLYEKNRKFGRVSPLDYVMTVCPRCLYSSF PKDWNALNPADNEAIRMATDARRSYIEKILGPLDFTQDRQIVLGAASYLLGMDCYQLRGVSVAPTPKKAVCAIRAAWYFS DLHEEFPHIGYDKIRDLLYQKAAVIYGYTLELMQNGNEPVDQAAGMLGPDTDNNWGFDGVIYLNAFLTKKFKDQMAPKPE DQVLLLSRAKRTLARLYGSGKASKGKPGPIVEMTRELYDEYNAILEAMGGEK >Mature_291_residues SQAAAQSKKVSFRAKESTACPICDENHQKEQMFQGGGRLIAGKLAQDLRRLYEKNRKFGRVSPLDYVMTVCPRCLYSSFP KDWNALNPADNEAIRMATDARRSYIEKILGPLDFTQDRQIVLGAASYLLGMDCYQLRGVSVAPTPKKAVCAIRAAWYFSD LHEEFPHIGYDKIRDLLYQKAAVIYGYTLELMQNGNEPVDQAAGMLGPDTDNNWGFDGVIYLNAFLTKKFKDQMAPKPED QVLLLSRAKRTLARLYGSGKASKGKPGPIVEMTRELYDEYNAILEAMGGEK
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018708 [H]
Pfam domain/function: PF09986 DUF2225 [H]
EC number: NA
Molecular weight: Translated: 32774; Mature: 32643
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAAAQSKKVSFRAKESTACPICDENHQKEQMFQGGGRLIAGKLAQDLRRLYEKNRKFG CCCHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCC RVSPLDYVMTVCPRCLYSSFPKDWNALNPADNEAIRMATDARRSYIEKILGPLDFTQDRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH IVLGAASYLLGMDCYQLRGVSVAPTPKKAVCAIRAAWYFSDLHEEFPHIGYDKIRDLLYQ HHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KAAVIYGYTLELMQNGNEPVDQAAGMLGPDTDNNWGFDGVIYLNAFLTKKFKDQMAPKPE HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC DQVLLLSRAKRTLARLYGSGKASKGKPGPIVEMTRELYDEYNAILEAMGGEK CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQAAAQSKKVSFRAKESTACPICDENHQKEQMFQGGGRLIAGKLAQDLRRLYEKNRKFG CCHHHHHHHCEEECCCCCCCCCCCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCC RVSPLDYVMTVCPRCLYSSFPKDWNALNPADNEAIRMATDARRSYIEKILGPLDFTQDRQ CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH IVLGAASYLLGMDCYQLRGVSVAPTPKKAVCAIRAAWYFSDLHEEFPHIGYDKIRDLLYQ HHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KAAVIYGYTLELMQNGNEPVDQAAGMLGPDTDNNWGFDGVIYLNAFLTKKFKDQMAPKPE HHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC DQVLLLSRAKRTLARLYGSGKASKGKPGPIVEMTRELYDEYNAILEAMGGEK CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]