| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is sglT [H]
Identifier: 183219667
GI number: 183219667
Start: 232411
End: 234003
Strand: Direct
Name: sglT [H]
Synonym: LEPBI_I0242
Alternate gene names: 183219667
Gene position: 232411-234003 (Clockwise)
Preceding gene: 183219656
Following gene: 183219668
Centisome position: 6.46
GC content: 40.55
Gene sequence:
>1593_bases ATGTTTGTTGCTCTAAGCCCTATCGATACCCTCATTGTCTTCGTTTTTGTTGGTTTTATGGTGGTGATTGGGGTGCTTTT GAAAAAATCCATGAACCATTCCACGGATTTTTTACTCGCAGGAAGGAAAATCCCCAGTTGGATCACGGGCATTGCCTTCA TTTCGGCCAATATCTCCGCCTTAGAATTGTTAGGGATGAGTGCCAGTGGGGCAGAGTATGGCTTTTTGACGTTTCATTTT TATTACTTAGGTGCGATCCCTGGAATGATTTTTCTTGGGATCTTTATGATGCCGTTTTATTACTCTACAAAGATACGAAG TGTCCCTGAATACCTGAGGTATCGTTTCAATCGAGAGGCGCACTTAGTCAATTCGCTCATCACCTTGTTGTCCCTAGCCC TTGGGTCAGGGATCTACTTGTATTCTTTGTCCTTAGTGTTTGAAACTTTATTTGGTTGGAACCCACACCTTTCCATTCTA TTCAGCGCTCTCATTGTTTTGATTTATACTTATTTTGGGGGACTCAGTTCTTCCATTTATACAGAAGTGATGCAGTTTTT TCTGACTGTCATTGGACTTTTCCCATTGGTCATTATCGGTTTAACAAAGTTAGGTGGATGGGATGGTCTGATGCAAAAAA TCCCCGAGTCACACAAACATATGTGGGTGGGACTTCCTGGAGGACAAAATGAACTGGGTTGGGATGTCTTAAGTGTCACC GTTGGACTTGGTTTTGTTTTGTCTTTTTCCTATTGGACCTGTGGGTTTGCGGAAGTGCAAAGGGCAATGGCTGCAAAAGA TTTTCGTGCGGCACGAAGGACACCTCTTATCGGAGCCATGTTCAAATTATTTTTACCGTTTCTCACAGTGATCCCTGGAC TCATCGCACTTGCCGAATATTCCACAGAAATGAATGGAGAGTATAACAAAAGTTTTCTCATCTTACTCAAGAACTTTTAT CCATCGGGGATGTTAGGGCTTGGAACGTCGGCACTGCTTGCTGCCTTTATGGCGGGGATGTCAAGTTCTGTCACAGCGAT GAATACTATTTTTACTTATGATATTTACCAAACTTATATCAATAAAGATAAAGATGACAAAACCTATTTAAGAATTGGAA AACAAAGTACGATGGTTGCCGTTATATTTGCCATCTTTACCTCTTATATAGCGATGCAATTTGAAAACATCATGAATTAC ATCCAGTTACTGTTTTCGTTTTTTAATGCCCCACTCATCTCAATTTTTTTACTTGGTATGTTTTGGAAAAAAGCATCCAA ATGGAGTGCCTTCTACGGGATGTTAGTGGGGACGGCCAGTGGCCTAATACACTATTTTTTATATGCCAATGGTTATTTGT ATTACAAATCAGATATGGTATCCAATTTTTATGGTGCCATTTATTCAGGAGTGTTTTGTTTTTTAGTGATGGTGGTTGTG AGTCTTTGGGAATCAGAAGATCCAAATCGAGACTTACATGGGTTAGTGTATGAAGACAGAGATCGAACCAATGAATTTTG GGACCCTAGGATCCTTGCCTGGGGAGTGATTCTCATTGTCCTTCTTGCAGGGTTTAATATCGTTTTTGCGTAA
Upstream 100 bases:
>100_bases TCGGCGGGTTTGGAATTTTTTTTAGGAAAATATTCCCAAGATCCACCCCTTCGGGATTTCCACTTTACAATCTCCAATTC TCGGTTTCCCTTACAAACCT
Downstream 100 bases:
>100_bases AGATTTATACAACCGTAACAAAATAGTAATTGAAGGAGAGTATTCTTCTTCCTATGTTTGTTGCAGTATACACAAAGACT ATGAAACCAAATCATTATAC
Product: putative sodium:solute symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MFVALSPIDTLIVFVFVGFMVVIGVLLKKSMNHSTDFLLAGRKIPSWITGIAFISANISALELLGMSASGAEYGFLTFHF YYLGAIPGMIFLGIFMMPFYYSTKIRSVPEYLRYRFNREAHLVNSLITLLSLALGSGIYLYSLSLVFETLFGWNPHLSIL FSALIVLIYTYFGGLSSSIYTEVMQFFLTVIGLFPLVIIGLTKLGGWDGLMQKIPESHKHMWVGLPGGQNELGWDVLSVT VGLGFVLSFSYWTCGFAEVQRAMAAKDFRAARRTPLIGAMFKLFLPFLTVIPGLIALAEYSTEMNGEYNKSFLILLKNFY PSGMLGLGTSALLAAFMAGMSSSVTAMNTIFTYDIYQTYINKDKDDKTYLRIGKQSTMVAVIFAIFTSYIAMQFENIMNY IQLLFSFFNAPLISIFLLGMFWKKASKWSAFYGMLVGTASGLIHYFLYANGYLYYKSDMVSNFYGAIYSGVFCFLVMVVV SLWESEDPNRDLHGLVYEDRDRTNEFWDPRILAWGVILIVLLAGFNIVFA
Sequences:
>Translated_530_residues MFVALSPIDTLIVFVFVGFMVVIGVLLKKSMNHSTDFLLAGRKIPSWITGIAFISANISALELLGMSASGAEYGFLTFHF YYLGAIPGMIFLGIFMMPFYYSTKIRSVPEYLRYRFNREAHLVNSLITLLSLALGSGIYLYSLSLVFETLFGWNPHLSIL FSALIVLIYTYFGGLSSSIYTEVMQFFLTVIGLFPLVIIGLTKLGGWDGLMQKIPESHKHMWVGLPGGQNELGWDVLSVT VGLGFVLSFSYWTCGFAEVQRAMAAKDFRAARRTPLIGAMFKLFLPFLTVIPGLIALAEYSTEMNGEYNKSFLILLKNFY PSGMLGLGTSALLAAFMAGMSSSVTAMNTIFTYDIYQTYINKDKDDKTYLRIGKQSTMVAVIFAIFTSYIAMQFENIMNY IQLLFSFFNAPLISIFLLGMFWKKASKWSAFYGMLVGTASGLIHYFLYANGYLYYKSDMVSNFYGAIYSGVFCFLVMVVV SLWESEDPNRDLHGLVYEDRDRTNEFWDPRILAWGVILIVLLAGFNIVFA >Mature_530_residues MFVALSPIDTLIVFVFVGFMVVIGVLLKKSMNHSTDFLLAGRKIPSWITGIAFISANISALELLGMSASGAEYGFLTFHF YYLGAIPGMIFLGIFMMPFYYSTKIRSVPEYLRYRFNREAHLVNSLITLLSLALGSGIYLYSLSLVFETLFGWNPHLSIL FSALIVLIYTYFGGLSSSIYTEVMQFFLTVIGLFPLVIIGLTKLGGWDGLMQKIPESHKHMWVGLPGGQNELGWDVLSVT VGLGFVLSFSYWTCGFAEVQRAMAAKDFRAARRTPLIGAMFKLFLPFLTVIPGLIALAEYSTEMNGEYNKSFLILLKNFY PSGMLGLGTSALLAAFMAGMSSSVTAMNTIFTYDIYQTYINKDKDDKTYLRIGKQSTMVAVIFAIFTSYIAMQFENIMNY IQLLFSFFNAPLISIFLLGMFWKKASKWSAFYGMLVGTASGLIHYFLYANGYLYYKSDMVSNFYGAIYSGVFCFLVMVVV SLWESEDPNRDLHGLVYEDRDRTNEFWDPRILAWGVILIVLLAGFNIVFA
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI110835708, Length=576, Percent_Identity=26.2152777777778, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI14140236, Length=552, Percent_Identity=24.8188405797101, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI4507033, Length=564, Percent_Identity=26.063829787234, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4507031, Length=565, Percent_Identity=25.1327433628319, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI206597483, Length=520, Percent_Identity=24.8076923076923, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI206597487, Length=458, Percent_Identity=24.8908296943231, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI17941285, Length=464, Percent_Identity=23.4913793103448, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI109659836, Length=480, Percent_Identity=25.4166666666667, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI109659839, Length=496, Percent_Identity=24.7983870967742, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI256985183, Length=430, Percent_Identity=22.5581395348837, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI167466278, Length=446, Percent_Identity=21.9730941704036, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI4507035, Length=430, Percent_Identity=22.093023255814, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI157671931, Length=427, Percent_Identity=20.3747072599532, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI310128183, Length=432, Percent_Identity=22.2222222222222, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1790113, Length=455, Percent_Identity=23.5164835164835, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1787251, Length=449, Percent_Identity=19.8218262806236, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790503, Length=448, Percent_Identity=22.5446428571429, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32566512, Length=361, Percent_Identity=21.8836565096953, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533094, Length=494, Percent_Identity=19.8380566801619, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573698, Length=443, Percent_Identity=23.9277652370203, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24651739, Length=471, Percent_Identity=21.2314225053079, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI281362918, Length=455, Percent_Identity=20.8791208791209, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI24651741, Length=436, Percent_Identity=20.1834862385321, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24645928, Length=462, Percent_Identity=22.9437229437229, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221459586, Length=423, Percent_Identity=21.0401891252955, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI221459588, Length=427, Percent_Identity=22.0140515222482, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641117, Length=449, Percent_Identity=22.71714922049, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24650192, Length=348, Percent_Identity=22.1264367816092, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI221459582, Length=421, Percent_Identity=23.0403800475059, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI221459584, Length=415, Percent_Identity=21.2048192771084, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640370, Length=431, Percent_Identity=25.754060324826, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI281362054, Length=356, Percent_Identity=23.876404494382, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI281362052, Length=356, Percent_Identity=23.876404494382, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI281362050, Length=356, Percent_Identity=23.876404494382, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648056, Length=356, Percent_Identity=23.876404494382, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356827, Length=356, Percent_Identity=23.876404494382, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59612; Mature: 59612
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVALSPIDTLIVFVFVGFMVVIGVLLKKSMNHSTDFLLAGRKIPSWITGIAFISANISA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCHHH LELLGMSASGAEYGFLTFHFYYLGAIPGMIFLGIFMMPFYYSTKIRSVPEYLRYRFNREA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH HLVNSLITLLSLALGSGIYLYSLSLVFETLFGWNPHLSILFSALIVLIYTYFGGLSSSIY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH TEVMQFFLTVIGLFPLVIIGLTKLGGWDGLMQKIPESHKHMWVGLPGGQNELGWDVLSVT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH VGLGFVLSFSYWTCGFAEVQRAMAAKDFRAARRTPLIGAMFKLFLPFLTVIPGLIALAEY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH STEMNGEYNKSFLILLKNFYPSGMLGLGTSALLAAFMAGMSSSVTAMNTIFTYDIYQTYI HHHCCCCCCCHHEEEEHHCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NKDKDDKTYLRIGKQSTMVAVIFAIFTSYIAMQFENIMNYIQLLFSFFNAPLISIFLLGM CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FWKKASKWSAFYGMLVGTASGLIHYFLYANGYLYYKSDMVSNFYGAIYSGVFCFLVMVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH SLWESEDPNRDLHGLVYEDRDRTNEFWDPRILAWGVILIVLLAGFNIVFA HHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MFVALSPIDTLIVFVFVGFMVVIGVLLKKSMNHSTDFLLAGRKIPSWITGIAFISANISA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCHHH LELLGMSASGAEYGFLTFHFYYLGAIPGMIFLGIFMMPFYYSTKIRSVPEYLRYRFNREA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH HLVNSLITLLSLALGSGIYLYSLSLVFETLFGWNPHLSILFSALIVLIYTYFGGLSSSIY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHH TEVMQFFLTVIGLFPLVIIGLTKLGGWDGLMQKIPESHKHMWVGLPGGQNELGWDVLSVT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH VGLGFVLSFSYWTCGFAEVQRAMAAKDFRAARRTPLIGAMFKLFLPFLTVIPGLIALAEY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH STEMNGEYNKSFLILLKNFYPSGMLGLGTSALLAAFMAGMSSSVTAMNTIFTYDIYQTYI HHHCCCCCCCHHEEEEHHCCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH NKDKDDKTYLRIGKQSTMVAVIFAIFTSYIAMQFENIMNYIQLLFSFFNAPLISIFLLGM CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH FWKKASKWSAFYGMLVGTASGLIHYFLYANGYLYYKSDMVSNFYGAIYSGVFCFLVMVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH SLWESEDPNRDLHGLVYEDRDRTNEFWDPRILAWGVILIVLLAGFNIVFA HHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]