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The map label for this gene is ydjI [H]

Identifier: 183219582

GI number: 183219582

Start: 153198

End: 154202

Strand: Reverse

Name: ydjI [H]

Synonym: LEPBI_I0157

Alternate gene names: 183219582

Gene position: 154202-153198 (Counterclockwise)

Preceding gene: 183219583

Following gene: 183219579

Centisome position: 4.28

GC content: 41.99

Gene sequence:

>1005_bases
ATGGCATTAATAGACAGAATAAAATTTGAAGGAAACCCAAGTGAAATCGTTTGGAAATACCCATCCGATGAAATCAGTAC
CGCTGGGCAACTCATTGTGGATGAAAACTTGGAAGCAATCTTTTTCAAAGAAGGAAAGGCTTTAGATACATTTGGTCCAG
GAACCCATACACTCAAAACGGGTAACATTCCCATTTTAGAAGCACTCGTCAACCTTCCGTTTGGTGGAAAAACTCCCTTC
ACTGCAGAAGTGTATTATGTAAACAAATCCATTATGGCTTTGAAATGGGGAACCACAACTCCCATTCCTCTTGAAGACCC
TAAATACAAAATTGTTCTCAATATACGAGCGTTTGGTGACTACAAATTCAGAGTCAAAGATTCACGCTCTTTTTTACTGA
ATGTGGTCAAAGGGGGAAACAGAACCACAAACGAAGCCATCGATGAATTTTTAAAACCAAACATCGTCCGTGGGATTGGT
GACTTTATCTCCGAAGTCATTCTGAACAACAATACTTCGGTAGTAGAGATCAACAAATACCGTGATGAAAGTTCCACTGC
TGGCCGAGTGAAATTGGCTCCAGAATTTGAAAAGTATGGACTAGACCTAACCGAATTTAACGTATCTTCGGTGAACTTTG
ACCAAAACGATCCTAACTACCAACGAATCCAAAAAATCATCACAGACAAATTTGAAATTGATATGTTAGGTGATAAATAT
CAACAGAAAAAAATGTTCGATATTGGACAAGCTGCCGCAGAAAACGAAGGCCAAGGTGGTGGCATGATGGGTGCTGGTAT
GGGCATGGGAATGGGGATGAATATGGGCAATATGATGGGCAACATGATGAACCAAGGCGGTGGACAAAACCAAGCTGGTG
GAGCAGCTCCTGCAGCCAATGACCCAGCCGCAAGGATTGCCAAACTGAAAGGCCTACTTGACCAGGGGCTTATCAGCGCC
GAAGAATTTGATGCGAAGAAAAAGGAGATCCTTTCTTCGATGTAA

Upstream 100 bases:

>100_bases
AGCCGCAATTGAGGCGGTGAACAAGTTGTTTCTCGATTTTGAAACACAATTTGAAGCAAGAAACTCAATCTTTTTAAAAT
CATAAACTAAGGAAAATAAA

Downstream 100 bases:

>100_bases
GGAGATAAAATTCTTCCAGATACTGTTTTCAATCCTATCGAACATTCCACATGGTTTTCGTTCGATGGGATTGGAAATCC
AAGTTTACGAAAACAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MALIDRIKFEGNPSEIVWKYPSDEISTAGQLIVDENLEAIFFKEGKALDTFGPGTHTLKTGNIPILEALVNLPFGGKTPF
TAEVYYVNKSIMALKWGTTTPIPLEDPKYKIVLNIRAFGDYKFRVKDSRSFLLNVVKGGNRTTNEAIDEFLKPNIVRGIG
DFISEVILNNNTSVVEINKYRDESSTAGRVKLAPEFEKYGLDLTEFNVSSVNFDQNDPNYQRIQKIITDKFEIDMLGDKY
QQKKMFDIGQAAAENEGQGGGMMGAGMGMGMGMNMGNMMGNMMNQGGGQNQAGGAAPAANDPAARIAKLKGLLDQGLISA
EEFDAKKKEILSSM

Sequences:

>Translated_334_residues
MALIDRIKFEGNPSEIVWKYPSDEISTAGQLIVDENLEAIFFKEGKALDTFGPGTHTLKTGNIPILEALVNLPFGGKTPF
TAEVYYVNKSIMALKWGTTTPIPLEDPKYKIVLNIRAFGDYKFRVKDSRSFLLNVVKGGNRTTNEAIDEFLKPNIVRGIG
DFISEVILNNNTSVVEINKYRDESSTAGRVKLAPEFEKYGLDLTEFNVSSVNFDQNDPNYQRIQKIITDKFEIDMLGDKY
QQKKMFDIGQAAAENEGQGGGMMGAGMGMGMGMNMGNMMGNMMNQGGGQNQAGGAAPAANDPAARIAKLKGLLDQGLISA
EEFDAKKKEILSSM
>Mature_333_residues
ALIDRIKFEGNPSEIVWKYPSDEISTAGQLIVDENLEAIFFKEGKALDTFGPGTHTLKTGNIPILEALVNLPFGGKTPFT
AEVYYVNKSIMALKWGTTTPIPLEDPKYKIVLNIRAFGDYKFRVKDSRSFLLNVVKGGNRTTNEAIDEFLKPNIVRGIGD
FISEVILNNNTSVVEINKYRDESSTAGRVKLAPEFEKYGLDLTEFNVSSVNFDQNDPNYQRIQKIITDKFEIDMLGDKYQ
QKKMFDIGQAAAENEGQGGGMMGAGMGMGMGMNMGNMMGNMMNQGGGQNQAGGAAPAANDPAARIAKLKGLLDQGLISAE
EFDAKKKEILSSM

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36640; Mature: 36509

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIDRIKFEGNPSEIVWKYPSDEISTAGQLIVDENLEAIFFKEGKALDTFGPGTHTLKT
CCCCCCEEECCCCCEEEEECCCHHHHCCCCEEEECCCEEEEEECCCEECCCCCCCCEEEC
GNIPILEALVNLPFGGKTPFTAEVYYVNKSIMALKWGTTTPIPLEDPKYKIVLNIRAFGD
CCCHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEEECC
YKFRVKDSRSFLLNVVKGGNRTTNEAIDEFLKPNIVRGIGDFISEVILNNNTSVVEINKY
EEEEEECCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECC
RDESSTAGRVKLAPEFEKYGLDLTEFNVSSVNFDQNDPNYQRIQKIITDKFEIDMLGDKY
CCCCCCCCEEEECCCHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHCCEEEEECCCHH
QQKKMFDIGQAAAENEGQGGGMMGAGMGMGMGMNMGNMMGNMMNQGGGQNQAGGAAPAAN
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
DPAARIAKLKGLLDQGLISAEEFDAKKKEILSSM
CHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCC
>Mature Secondary Structure 
ALIDRIKFEGNPSEIVWKYPSDEISTAGQLIVDENLEAIFFKEGKALDTFGPGTHTLKT
CCCCCEEECCCCCEEEEECCCHHHHCCCCEEEECCCEEEEEECCCEECCCCCCCCEEEC
GNIPILEALVNLPFGGKTPFTAEVYYVNKSIMALKWGTTTPIPLEDPKYKIVLNIRAFGD
CCCHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEEEEEECC
YKFRVKDSRSFLLNVVKGGNRTTNEAIDEFLKPNIVRGIGDFISEVILNNNTSVVEINKY
EEEEEECCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECC
RDESSTAGRVKLAPEFEKYGLDLTEFNVSSVNFDQNDPNYQRIQKIITDKFEIDMLGDKY
CCCCCCCCEEEECCCHHHHCCCEEEECCEEECCCCCCCCHHHHHHHHHCCEEEEECCCHH
QQKKMFDIGQAAAENEGQGGGMMGAGMGMGMGMNMGNMMGNMMNQGGGQNQAGGAAPAAN
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
DPAARIAKLKGLLDQGLISAEEFDAKKKEILSSM
CHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]