BacMap

Definition	Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession	NC_010602
Length	3,599,677

Click here to switch to the map view.

The map label for this gene is fabG2 [C]

Identifier: 183219553

GI number: 183219553

Start: 126550

End: 127305

Strand: Reverse

Name: fabG2 [C]

Synonym: LEPBI_I0126

Alternate gene names: 183219553

Gene position: 127305-126550 (Counterclockwise)

Preceding gene: 183219557

Following gene: 183219550

Centisome position: 3.54

GC content: 40.74

Gene sequence:

>756_bases
ATGAAAGTAGCTATCATCACAGGTGGAAGCAATGGTATTGGGAAAGCAACGGCTCTGGAGTTAGGCAAACGAGGGATCGG
TGTGATCCTCACTTACAATACTTACAAAGACCGGGCAGAAAAAGTTGTGAATGAAATCGAAAAGAATAAAGGGGTTCGTG
CAGTCGCTCTGAAGTTGGATCTCACAAAAAAAGAAACGTTTGAACCTTTTGTCTCTGAAGTCAAAAACAAACTCGCTACA
ATTTGGAATCGATCAAGCTTTGATTACTTAGTGAATAACGGTGGAATTGGTGGTCCAATGCTTTTCACTGAATTAACGGA
AGAGTATTTTGAACAAATTTTAAATACCAACTACAAAGGCCCAATCTTCTTATCACAAAAATTGGTAACTCTGATGGAAG
ATAATGGTGCCATCGTCAACACTTCCAGTTCCTCCAGTTCCAAAGCCTTTGTGGGTTATTCCATTTATGGATCCCTCAAA
GCAGCGCTGTCTTCATGGACACGTTATCTTGCCAATGAGCTAGCACCTCGTAAAATTCGAGTGAATGCTGTTTCCCCTGG
CCCAACTCATAGTAATTTTGGAGATGGAGCGTTTGATAAATACCCAGAATTCATCAAACCTTTGGTCGACCAAACTGCTT
TTGGTCGTATTGGTTTACCAGAAGATATTGGTAAGGTGATCGTAAATATACTCTCTGATGACTTTGGATGGATGACAGCC
CAAGACATTGAAGTGTCAGGAGGACATTTGTTATAA

Upstream 100 bases:

>100_bases
CGTCACTTAAACGGTAAGAACCGACTTTTGTAAAAAAACTAACATTCGTTTGGATTCAAAAGACGATTCATCTGCCACTC
AAGTGTCCAAGGAGAATTTT

Downstream 100 bases:

>100_bases
GATTCGATAAAAAATATAACTGCCCTCTATTGTGATAGAGGGCAAATTTGTTAAGAAATATTTTCTTCAAACTCTCGGCG
CGCCACTTCTGCTTCTTTTT

Product: 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKVAIITGGSNGIGKATALELGKRGIGVILTYNTYKDRAEKVVNEIEKNKGVRAVALKLDLTKKETFEPFVSEVKNKLAT
IWNRSSFDYLVNNGGIGGPMLFTELTEEYFEQILNTNYKGPIFLSQKLVTLMEDNGAIVNTSSSSSSKAFVGYSIYGSLK
AALSSWTRYLANELAPRKIRVNAVSPGPTHSNFGDGAFDKYPEFIKPLVDQTAFGRIGLPEDIGKVIVNILSDDFGWMTA
QDIEVSGGHLL

Sequences:

>Translated_251_residues
MKVAIITGGSNGIGKATALELGKRGIGVILTYNTYKDRAEKVVNEIEKNKGVRAVALKLDLTKKETFEPFVSEVKNKLAT
IWNRSSFDYLVNNGGIGGPMLFTELTEEYFEQILNTNYKGPIFLSQKLVTLMEDNGAIVNTSSSSSSKAFVGYSIYGSLK
AALSSWTRYLANELAPRKIRVNAVSPGPTHSNFGDGAFDKYPEFIKPLVDQTAFGRIGLPEDIGKVIVNILSDDFGWMTA
QDIEVSGGHLL
>Mature_251_residues
MKVAIITGGSNGIGKATALELGKRGIGVILTYNTYKDRAEKVVNEIEKNKGVRAVALKLDLTKKETFEPFVSEVKNKLAT
IWNRSSFDYLVNNGGIGGPMLFTELTEEYFEQILNTNYKGPIFLSQKLVTLMEDNGAIVNTSSSSSSKAFVGYSIYGSLK
AALSSWTRYLANELAPRKIRVNAVSPGPTHSNFGDGAFDKYPEFIKPLVDQTAFGRIGLPEDIGKVIVNILSDDFGWMTA
QDIEVSGGHLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=29.0836653386454, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI19923817, Length=271, Percent_Identity=28.0442804428044, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=29.7435897435897, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=25.0965250965251, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI40254992, Length=250, Percent_Identity=27.6, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI4557649, Length=188, Percent_Identity=29.2553191489362, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI4503817, Length=230, Percent_Identity=25.6521739130435, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=26.5873015873016, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI226371731, Length=190, Percent_Identity=28.9473684210526, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=24.896265560166, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=27.6679841897233, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI2367175, Length=263, Percent_Identity=31.1787072243346, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=29.0836653386454, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=30.9236947791165, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=27.7777777777778, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=28.740157480315, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790717, Length=254, Percent_Identity=27.9527559055118, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=27.6679841897233, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=28.2352941176471, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=26.7441860465116, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=24.6031746031746, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367365, Length=229, Percent_Identity=27.0742358078603, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787526, Length=217, Percent_Identity=25.8064516129032, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787820, Length=188, Percent_Identity=23.936170212766, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=22.2222222222222, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=32.7067669172932, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=261, Percent_Identity=30.2681992337165, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=28.1746031746032, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=31.8181818181818, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=30.7116104868914, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=31.640625, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=29.0697674418605, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=30.3370786516854, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=30.3703703703704, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=268, Percent_Identity=30.5970149253731, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=32.8358208955224, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=29.9242424242424, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=25.0996015936255, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=274, Percent_Identity=29.5620437956204, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=269, Percent_Identity=30.4832713754647, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=28.9473684210526, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=26, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=271, Percent_Identity=32.1033210332103, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71997402, Length=198, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.996282527881, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=267, Percent_Identity=29.5880149812734, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=270, Percent_Identity=30.3703703703704, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=27.2373540856031, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=272, Percent_Identity=29.0441176470588, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322795, Length=226, Percent_Identity=27.4336283185841, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=32.2834645669291, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.0158102766798, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=31.2252964426877, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=31.0483870967742, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=30.8300395256917, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=28.968253968254, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=27.5590551181102, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24644337, Length=168, Percent_Identity=33.9285714285714, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI17737361, Length=237, Percent_Identity=27.0042194092827, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574402, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584744, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584752, Length=188, Percent_Identity=31.3829787234043, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27412; Mature: 27412

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIITGGSNGIGKATALELGKRGIGVILTYNTYKDRAEKVVNEIEKNKGVRAVALKLD
CEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEE
LTKKETFEPFVSEVKNKLATIWNRSSFDYLVNNGGIGGPMLFTELTEEYFEQILNTNYKG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PIFLSQKLVTLMEDNGAIVNTSSSSSSKAFVGYSIYGSLKAALSSWTRYLANELAPRKIR
CEEEHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
VNAVSPGPTHSNFGDGAFDKYPEFIKPLVDQTAFGRIGLPEDIGKVIVNILSDDFGWMTA
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEE
QDIEVSGGHLL
CCEECCCCCCC
>Mature Secondary Structure
MKVAIITGGSNGIGKATALELGKRGIGVILTYNTYKDRAEKVVNEIEKNKGVRAVALKLD
CEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEE
LTKKETFEPFVSEVKNKLATIWNRSSFDYLVNNGGIGGPMLFTELTEEYFEQILNTNYKG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PIFLSQKLVTLMEDNGAIVNTSSSSSSKAFVGYSIYGSLKAALSSWTRYLANELAPRKIR
CEEEHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
VNAVSPGPTHSNFGDGAFDKYPEFIKPLVDQTAFGRIGLPEDIGKVIVNILSDDFGWMTA
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEE
QDIEVSGGHLL
CCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]