Click here to switch to the map view.

The map label for this gene is 183219545

Identifier: 183219545

GI number: 183219545

Start: 121989

End: 122585

Strand: Reverse

Name: 183219545

Synonym: LEPBI_I0118

Alternate gene names: NA

Gene position: 122585-121989 (Counterclockwise)

Preceding gene: 183219547

Following gene: 183219544

Centisome position: 3.41

GC content: 40.2

Gene sequence:

>597_bases
ATGGGCAAAGGTGAGGACACAAAATCTCTGATTTTAGACAAAGCAGTCCAAATGGCAAGTGTCCAAGGTTTGGAAGGGCT
TACCATTGGATCTCTTGCCGATGAATTAGGGATGTCTAAAAGTGGTCTCTTTGCAAAATTCGCATCCAAAGAAAACCTTC
AAATCGAAGTCCTTCGGGTTGGAAGTGAACTCTTTCGAAGGAATGTTGTGTATCCGGCTCTCAAAACCAAACCGGGACTC
GCTAGGCTCAAAATGGCATTCCAAATGTGGTTGTCTTGGGCAAACACAGAAAGTCTCCCTGGTGGTTGTTTGTTTTTGGC
ATCCAGTTCGGAGTTTGACGATCGTCCAGGAGTTGTCAGGGACCATTTGAAAAAAACCCAACTCTCCTGGCAAAATACAT
TAAAACAATTTGTCCAGGATGCGAAAGACTGTTTAGAGTTAGATGCCAATACAAATGTCGATAAAATGGTGCAAGAGATT
TGGGGGCTTATTTTAGGTTTTCATTTTTACAATCGACTATTAGAAGATAAAAACTCTGAAAAAAGAACCAAACAAAGTTT
TAACGAATTAATCAAACGGCATAAATACGATTTTTGA

Upstream 100 bases:

>100_bases
ACCAAACTCAAGTCAAAAAATATTTGAAAAAGATGGAATTGAGGCCAAAGGTTAAAAAAAAATACTTTACAAATTTAAAC
GAACGATCGTACTTTTATTT

Downstream 100 bases:

>100_bases
AATTAGGTTAGATGAGAATATGTTTATCAAACAAAGAGGGTTTTACTATGGAATCAAATAGCACGATCGTTCGTTCTTTT
AACAGAACGTATCCAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASKENLQIEVLRVGSELFRRNVVYPALKTKPGL
ARLKMAFQMWLSWANTESLPGGCLFLASSSEFDDRPGVVRDHLKKTQLSWQNTLKQFVQDAKDCLELDANTNVDKMVQEI
WGLILGFHFYNRLLEDKNSEKRTKQSFNELIKRHKYDF

Sequences:

>Translated_198_residues
MGKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASKENLQIEVLRVGSELFRRNVVYPALKTKPGL
ARLKMAFQMWLSWANTESLPGGCLFLASSSEFDDRPGVVRDHLKKTQLSWQNTLKQFVQDAKDCLELDANTNVDKMVQEI
WGLILGFHFYNRLLEDKNSEKRTKQSFNELIKRHKYDF
>Mature_197_residues
GKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASKENLQIEVLRVGSELFRRNVVYPALKTKPGLA
RLKMAFQMWLSWANTESLPGGCLFLASSSEFDDRPGVVRDHLKKTQLSWQNTLKQFVQDAKDCLELDANTNVDKMVQEIW
GLILGFHFYNRLLEDKNSEKRTKQSFNELIKRHKYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22465; Mature: 22334

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASKENLQIEVLRV
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEHHHHH
GSELFRRNVVYPALKTKPGLARLKMAFQMWLSWANTESLPGGCLFLASSSEFDDRPGVVR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH
DHLKKTQLSWQNTLKQFVQDAKDCLELDANTNVDKMVQEIWGLILGFHFYNRLLEDKNSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KRTKQSFNELIKRHKYDF
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKGEDTKSLILDKAVQMASVQGLEGLTIGSLADELGMSKSGLFAKFASKENLQIEVLRV
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEHHHHH
GSELFRRNVVYPALKTKPGLARLKMAFQMWLSWANTESLPGGCLFLASSSEFDDRPGVVR
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH
DHLKKTQLSWQNTLKQFVQDAKDCLELDANTNVDKMVQEIWGLILGFHFYNRLLEDKNSE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KRTKQSFNELIKRHKYDF
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA