Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219507
Identifier: 183219507
GI number: 183219507
Start: 81423
End: 81656
Strand: Reverse
Name: 183219507
Synonym: LEPBI_I0080
Alternate gene names: NA
Gene position: 81656-81423 (Counterclockwise)
Preceding gene: 183219509
Following gene: 183219505
Centisome position: 2.27
GC content: 43.59
Gene sequence:
>234_bases ATGGCTGATAAAAGTATCAAACAACCCGAGAATGTACCAGGAAAATACTATGTCGACCAGACTTGTGTTCCCTGTAATGA CTGTGTCAAAGAGGCACCAAACCTGCTAGAATACAGTGCGGACGAAACGCACATTTTTTTCAAAAATCAGCCTAAAAACC AGGCAGAAGAAAAACAAGCAAAAGCAGCAATGGCAATGTGTCCCGTCGATGCGATTGGCGACGATGGGGAATAA
Upstream 100 bases:
>100_bases GAGTCCGAGGAATGGTTCATCCTCGACGATGAGGATGTTCTTTTTCGTCATATATGCTTTATTTTATAAGGGGGGGTCTG TTAAAAAGTAAAAATACGAT
Downstream 100 bases:
>100_bases TTAAGAATAATAGAATTCTCTAATATTCTTTGCGACTACATCGGGTCTCTCTAAATGGATGGCATGTCTAATTTTTGGGA TCCAAACCACTTTACTTTTT
Product: putative ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MADKSIKQPENVPGKYYVDQTCVPCNDCVKEAPNLLEYSADETHIFFKNQPKNQAEEKQAKAAMAMCPVDAIGDDGE
Sequences:
>Translated_77_residues MADKSIKQPENVPGKYYVDQTCVPCNDCVKEAPNLLEYSADETHIFFKNQPKNQAEEKQAKAAMAMCPVDAIGDDGE >Mature_76_residues ADKSIKQPENVPGKYYVDQTCVPCNDCVKEAPNLLEYSADETHIFFKNQPKNQAEEKQAKAAMAMCPVDAIGDDGE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8523; Mature: 8391
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKSIKQPENVPGKYYVDQTCVPCNDCVKEAPNLLEYSADETHIFFKNQPKNQAEEKQA CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCHHCCCCCCCCEEEECCCCCCHHHHHHH KAAMAMCPVDAIGDDGE HHHHHHCCCCCCCCCCC >Mature Secondary Structure ADKSIKQPENVPGKYYVDQTCVPCNDCVKEAPNLLEYSADETHIFFKNQPKNQAEEKQA CCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCHHCCCCCCCCEEEECCCCCCHHHHHHH KAAMAMCPVDAIGDDGE HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA