Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219494
Identifier: 183219494
GI number: 183219494
Start: 66761
End: 68122
Strand: Direct
Name: 183219494
Synonym: LEPBI_I0067
Alternate gene names: NA
Gene position: 66761-68122 (Clockwise)
Preceding gene: 183219492
Following gene: 183219498
Centisome position: 1.85
GC content: 40.38
Gene sequence:
>1362_bases TTGGCATTTCCTTTTCCCACTGATTGTATACAGGCACAGGAAATTTCAATCAAAAGGTTTCGGCTGAATCGGCCGATGAT GATAAAAGACAGTATGAAAAAATTACTAATGATTCTATTCGTTTTGGGATTTTTAATGAATCCCCTTGTTTCAGAAGAGG AAACGTCGGAAGAATCACCTTTCGCAACGACAAAAAAGAAAGTGCAACTTTGGAAAGGGGAAGTAACTGGAGTTTATAAA AATAGACTTTGGATCAAAGTGCGCATTTATCGAAATCAAAAGATTTCGAAGTATTCCCTTTCAGAATTAAAAACACTTTT TTCCGAAACCAAAGAGTTTCCCGTATACCAAAAACTCACCCACCTGAAACAAGGAATCCTCGTTGTGAGGGACACCATCT GGGAAGAAAAAAACATCAATAAAAACAATCAATTCACGGAAGTCGTGTTAGTTGGAGATTTTAAACCGGATCCAACTTCT AAAATGAAAGAAATCACAACGGATGCTTATATCGCTAGTTTCGTGGAAGAAGATTTTTTTACAGAACCAGATGCTTTTTT TAAAGGAAGATTTACTCCACCACGGAAAACAGTGTTTCATCCCAAAGATCGTAAGGAGATGGTTCTTGTTTCCAGAGGAT TATTTTTGTACGGCCAAGGAACGGATCCTTCTGCAGATAGTTTTAATCCTTATTTTTTAGAACCAAAAGCTTCCAATCTG AAAGAAATCCCTTCCTTTTACATTGATCGTTATGAAGTGACAAATGCCGAATATGATTTCTTTTTAAAACAAACCAATAC CAAATCACCACCACATTGGATTGGTGGGAAATACCCAGAGGGAGAAGGGGACCATCCTGTCATCCACCTCACTTACCGTG AAGTGGAACGTTATGCGGCCTGGGCAGGAAAACGCATTCCGAACGAATGGGAATGGGAAAAAGCCGCACGGGGACCAGGG GTTGTCGAATACACCAATCGTGACGAAACATTAGGATACCAAATCACGGCCACCAAATATCCATTCGGTGATGAGTATGA CAGTTTGTATTGTAATACGCGAGAATCAAAAATTGGAAAAACACAATCTGTTTATGAACTTTCCACGGAAGGAGCAAGTC CATATGGAGCACTTGGTATGTGTGGGAATGCTCCTGAGTGGACATCCAGTGACTACCAATTGTATCCAGGCCATCATATT AAAAACTTTTCGTTTGGGAAAATTTACAAAGTGGTGAGAGGTGGTTCGTACTCGGACTCGGCAAAAAATGCAACTGCCAG TGCGAGATCGTATGGTGGGATTCCTAATCTAAGCGAAGATAGACGAGCTGGTTTTCGTTTGGTGATGGATTACCGCGACT AA
Upstream 100 bases:
>100_bases GATGGTCGCGATCCGATGGAAGGTTCCAATTTGTGTGGAATCCGTTTTTAAGGAAATGAGGATGTTTTCTTTTTCCCGTT TGTATTGAAACTCAATCAAT
Downstream 100 bases:
>100_bases TTGAGACATTACTTGGCAGTGGGTTCGTTTTTTTTGCCAAGTTTTTTACAAATTTTGCCAAGCACATCTTGTTCTTCAGG CGAAAGGACAGAAAACTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MAFPFPTDCIQAQEISIKRFRLNRPMMIKDSMKKLLMILFVLGFLMNPLVSEEETSEESPFATTKKKVQLWKGEVTGVYK NRLWIKVRIYRNQKISKYSLSELKTLFSETKEFPVYQKLTHLKQGILVVRDTIWEEKNINKNNQFTEVVLVGDFKPDPTS KMKEITTDAYIASFVEEDFFTEPDAFFKGRFTPPRKTVFHPKDRKEMVLVSRGLFLYGQGTDPSADSFNPYFLEPKASNL KEIPSFYIDRYEVTNAEYDFFLKQTNTKSPPHWIGGKYPEGEGDHPVIHLTYREVERYAAWAGKRIPNEWEWEKAARGPG VVEYTNRDETLGYQITATKYPFGDEYDSLYCNTRESKIGKTQSVYELSTEGASPYGALGMCGNAPEWTSSDYQLYPGHHI KNFSFGKIYKVVRGGSYSDSAKNATASARSYGGIPNLSEDRRAGFRLVMDYRD
Sequences:
>Translated_453_residues MAFPFPTDCIQAQEISIKRFRLNRPMMIKDSMKKLLMILFVLGFLMNPLVSEEETSEESPFATTKKKVQLWKGEVTGVYK NRLWIKVRIYRNQKISKYSLSELKTLFSETKEFPVYQKLTHLKQGILVVRDTIWEEKNINKNNQFTEVVLVGDFKPDPTS KMKEITTDAYIASFVEEDFFTEPDAFFKGRFTPPRKTVFHPKDRKEMVLVSRGLFLYGQGTDPSADSFNPYFLEPKASNL KEIPSFYIDRYEVTNAEYDFFLKQTNTKSPPHWIGGKYPEGEGDHPVIHLTYREVERYAAWAGKRIPNEWEWEKAARGPG VVEYTNRDETLGYQITATKYPFGDEYDSLYCNTRESKIGKTQSVYELSTEGASPYGALGMCGNAPEWTSSDYQLYPGHHI KNFSFGKIYKVVRGGSYSDSAKNATASARSYGGIPNLSEDRRAGFRLVMDYRD >Mature_452_residues AFPFPTDCIQAQEISIKRFRLNRPMMIKDSMKKLLMILFVLGFLMNPLVSEEETSEESPFATTKKKVQLWKGEVTGVYKN RLWIKVRIYRNQKISKYSLSELKTLFSETKEFPVYQKLTHLKQGILVVRDTIWEEKNINKNNQFTEVVLVGDFKPDPTSK MKEITTDAYIASFVEEDFFTEPDAFFKGRFTPPRKTVFHPKDRKEMVLVSRGLFLYGQGTDPSADSFNPYFLEPKASNLK EIPSFYIDRYEVTNAEYDFFLKQTNTKSPPHWIGGKYPEGEGDHPVIHLTYREVERYAAWAGKRIPNEWEWEKAARGPGV VEYTNRDETLGYQITATKYPFGDEYDSLYCNTRESKIGKTQSVYELSTEGASPYGALGMCGNAPEWTSSDYQLYPGHHIK NFSFGKIYKVVRGGSYSDSAKNATASARSYGGIPNLSEDRRAGFRLVMDYRD
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194248087, Length=284, Percent_Identity=26.056338028169, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI257470975, Length=203, Percent_Identity=31.5270935960591, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI194248088, Length=299, Percent_Identity=24.7491638795987, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI226437577, Length=181, Percent_Identity=29.8342541436464, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52245; Mature: 52114
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPFPTDCIQAQEISIKRFRLNRPMMIKDSMKKLLMILFVLGFLMNPLVSEEETSEESP CCCCCCCHHHHHHHCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FATTKKKVQLWKGEVTGVYKNRLWIKVRIYRNQKISKYSLSELKTLFSETKEFPVYQKLT CHHHHHHHEEECCCEEEEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHH HLKQGILVVRDTIWEEKNINKNNQFTEVVLVGDFKPDPTSKMKEITTDAYIASFVEEDFF HHHHCEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC TEPDAFFKGRFTPPRKTVFHPKDRKEMVLVSRGLFLYGQGTDPSADSFNPYFLEPKASNL CCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEECCCCCCH KEIPSFYIDRYEVTNAEYDFFLKQTNTKSPPHWIGGKYPEGEGDHPVIHLTYREVERYAA HHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH WAGKRIPNEWEWEKAARGPGVVEYTNRDETLGYQITATKYPFGDEYDSLYCNTRESKIGK HHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHCCC TQSVYELSTEGASPYGALGMCGNAPEWTSSDYQLYPGHHIKNFSFGKIYKVVRGGSYSDS CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC AKNATASARSYGGIPNLSEDRRAGFRLVMDYRD CCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCC >Mature Secondary Structure AFPFPTDCIQAQEISIKRFRLNRPMMIKDSMKKLLMILFVLGFLMNPLVSEEETSEESP CCCCCCHHHHHHHCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC FATTKKKVQLWKGEVTGVYKNRLWIKVRIYRNQKISKYSLSELKTLFSETKEFPVYQKLT CHHHHHHHEEECCCEEEEEECEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHH HLKQGILVVRDTIWEEKNINKNNQFTEVVLVGDFKPDPTSKMKEITTDAYIASFVEEDFF HHHHCEEEEEHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC TEPDAFFKGRFTPPRKTVFHPKDRKEMVLVSRGLFLYGQGTDPSADSFNPYFLEPKASNL CCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCEEECCCCCCH KEIPSFYIDRYEVTNAEYDFFLKQTNTKSPPHWIGGKYPEGEGDHPVIHLTYREVERYAA HHHHHHHHCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH WAGKRIPNEWEWEKAARGPGVVEYTNRDETLGYQITATKYPFGDEYDSLYCNTRESKIGK HHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCHHHCCC TQSVYELSTEGASPYGALGMCGNAPEWTSSDYQLYPGHHIKNFSFGKIYKVVRGGSYSDS CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCC AKNATASARSYGGIPNLSEDRRAGFRLVMDYRD CCCCHHHHHHCCCCCCCCHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA