| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219466
Identifier: 183219466
GI number: 183219466
Start: 40125
End: 41177
Strand: Direct
Name: 183219466
Synonym: LEPBI_I0039
Alternate gene names: NA
Gene position: 40125-41177 (Clockwise)
Preceding gene: 183219465
Following gene: 183219470
Centisome position: 1.11
GC content: 34.57
Gene sequence:
>1053_bases ATGTCACATATTTCAATAAGTTTGCTCGTATGGATTCTTTTTCTTTTTGGATGCCCTCTGTTTTCACAAGTTGTCCAAGA GGAAAAAATAGAAAACAAACCGGCTCACCCTGTCCTTGATCCCAATCACAAAAGAAAAATAATCAGCGTATTCAATGAAC CATCTGGTGCGCGCTATTTTTCTATCAATCCTGGTGTACAATTCATCAGTTCTTCTGTTGATATTGTTGGTCCAAACGGA AAAGCTGTGATGGCCGAAGAAACAAACAGTGTATCTCGAAATACAAAACTGATGTATGATTTGAAAACAAAGGATTGGCA AATTGGAGAATATTGGGGTGTTTTTGTTTTAAATCGAAATGGATCTTTTCTGAATACAAGGCAAATTATAACGGTTACGC CGACTGTTGAAAATGAAAATGGAAGAGATAATGTGGATTTACAAACAGAAGTAAAAGGAACTTATTCCATGTTACTTCCA GTTTTATATTTAGGAAAAGGTGGAAATGATAATTTTCGAATTGGTATGGGGTTTGGTGTAGGTTCCGTCAACTTACAAGG AACAGCTGATTTTAATGATGGAATTGGATTATTTACCAATGCGGTTGTATTCAATTCAGGAAATACCTTCGACAATAAAA TTGATAATTTGGGAAGATTTTCACTTTTGACAACTGGTAATATAGATGGAGATCCCTACAAAGCATATTTATTATCCAAT TTATCAGCTGGTAACAACTTAGAATTATTGGGAGCCTATTCCTTGTTAACCGGAAAAAGTTCAGGTTCCATTGAACCAAT TAGTTATTTAATGTTTGCTGCTGCCGCAAATGGTCAATTGAATCCTTTAGAAATTTATGCACTTTCAACTCTCAGCAGAG GAAAAGTAGATTCACGAACCAACTATGCAAAAAGTTATTATTTCTTTTATGAAATACCTATAGGACCAGTTACATGGAGA CTTGGTTTTGGGGGACCATTCTATACACAAAATAATTATACAATTGATATTTCTGGGTTTGAAATGTCACTCTATACACC AATCGAAATCTAA
Upstream 100 bases:
>100_bases AATCGATTTAATTAAACTGAAGTATAACTTAAATTCTGAAAAACAAGTATTGTCTGTTTAATCAGATAGTATAAATTTGA TTTTCTTTTGGTGAATTAAA
Downstream 100 bases:
>100_bases TCCTTTCCATTTCGATTGGTGTAGCGTTTTTGTTCTATTTTTGTTGAATCGATTCCTTCAAAGTTGTTATGTCAATTTTT TGCATTTGTAACATGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSHISISLLVWILFLFGCPLFSQVVQEEKIENKPAHPVLDPNHKRKIISVFNEPSGARYFSINPGVQFISSSVDIVGPNG KAVMAEETNSVSRNTKLMYDLKTKDWQIGEYWGVFVLNRNGSFLNTRQIITVTPTVENENGRDNVDLQTEVKGTYSMLLP VLYLGKGGNDNFRIGMGFGVGSVNLQGTADFNDGIGLFTNAVVFNSGNTFDNKIDNLGRFSLLTTGNIDGDPYKAYLLSN LSAGNNLELLGAYSLLTGKSSGSIEPISYLMFAAAANGQLNPLEIYALSTLSRGKVDSRTNYAKSYYFFYEIPIGPVTWR LGFGGPFYTQNNYTIDISGFEMSLYTPIEI
Sequences:
>Translated_350_residues MSHISISLLVWILFLFGCPLFSQVVQEEKIENKPAHPVLDPNHKRKIISVFNEPSGARYFSINPGVQFISSSVDIVGPNG KAVMAEETNSVSRNTKLMYDLKTKDWQIGEYWGVFVLNRNGSFLNTRQIITVTPTVENENGRDNVDLQTEVKGTYSMLLP VLYLGKGGNDNFRIGMGFGVGSVNLQGTADFNDGIGLFTNAVVFNSGNTFDNKIDNLGRFSLLTTGNIDGDPYKAYLLSN LSAGNNLELLGAYSLLTGKSSGSIEPISYLMFAAAANGQLNPLEIYALSTLSRGKVDSRTNYAKSYYFFYEIPIGPVTWR LGFGGPFYTQNNYTIDISGFEMSLYTPIEI >Mature_349_residues SHISISLLVWILFLFGCPLFSQVVQEEKIENKPAHPVLDPNHKRKIISVFNEPSGARYFSINPGVQFISSSVDIVGPNGK AVMAEETNSVSRNTKLMYDLKTKDWQIGEYWGVFVLNRNGSFLNTRQIITVTPTVENENGRDNVDLQTEVKGTYSMLLPV LYLGKGGNDNFRIGMGFGVGSVNLQGTADFNDGIGLFTNAVVFNSGNTFDNKIDNLGRFSLLTTGNIDGDPYKAYLLSNL SAGNNLELLGAYSLLTGKSSGSIEPISYLMFAAAANGQLNPLEIYALSTLSRGKVDSRTNYAKSYYFFYEIPIGPVTWRL GFGGPFYTQNNYTIDISGFEMSLYTPIEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38606; Mature: 38475
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHISISLLVWILFLFGCPLFSQVVQEEKIENKPAHPVLDPNHKRKIISVFNEPSGARYF CCEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE SINPGVQFISSSVDIVGPNGKAVMAEETNSVSRNTKLMYDLKTKDWQIGEYWGVFVLNRN EECCCHHHHCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEECCEEEEEEECCC GSFLNTRQIITVTPTVENENGRDNVDLQTEVKGTYSMLLPVLYLGKGGNDNFRIGMGFGV CCEEECCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHEEHHEECCCCCCCEEEEEEECC GSVNLQGTADFNDGIGLFTNAVVFNSGNTFDNKIDNLGRFSLLTTGNIDGDPYKAYLLSN CEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEC LSAGNNLELLGAYSLLTGKSSGSIEPISYLMFAAAANGQLNPLEIYALSTLSRGKVDSRT CCCCCCEEEEEEEEEEECCCCCCCCHHHEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC NYAKSYYFFYEIPIGPVTWRLGFGGPFYTQNNYTIDISGFEMSLYTPIEI CCEEEEEEEEEECCCCEEEEEECCCCEEECCCEEEEEECEEEEEEEECCC >Mature Secondary Structure SHISISLLVWILFLFGCPLFSQVVQEEKIENKPAHPVLDPNHKRKIISVFNEPSGARYF CEEHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEE SINPGVQFISSSVDIVGPNGKAVMAEETNSVSRNTKLMYDLKTKDWQIGEYWGVFVLNRN EECCCHHHHCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCCCEEECCEEEEEEECCC GSFLNTRQIITVTPTVENENGRDNVDLQTEVKGTYSMLLPVLYLGKGGNDNFRIGMGFGV CCEEECCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHEEHHEECCCCCCCEEEEEEECC GSVNLQGTADFNDGIGLFTNAVVFNSGNTFDNKIDNLGRFSLLTTGNIDGDPYKAYLLSN CEEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEC LSAGNNLELLGAYSLLTGKSSGSIEPISYLMFAAAANGQLNPLEIYALSTLSRGKVDSRT CCCCCCEEEEEEEEEEECCCCCCCCHHHEEEEEEECCCCCCEEEEEEEECCCCCCCCCCC NYAKSYYFFYEIPIGPVTWRLGFGGPFYTQNNYTIDISGFEMSLYTPIEI CCEEEEEEEEEECCCCEEEEEECCCCEEECCCEEEEEECEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA