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The map label for this gene is yfbE [C]

Identifier: 183219464

GI number: 183219464

Start: 37383

End: 38582

Strand: Reverse

Name: yfbE [C]

Synonym: LEPBI_I0037

Alternate gene names: 183219464

Gene position: 38582-37383 (Counterclockwise)

Preceding gene: 183219467

Following gene: 183219460

Centisome position: 1.07

GC content: 40.75

Gene sequence:

>1200_bases
ATGAATATGCTCACATCTCGCAAAACCTTTCTACCGTTTGCTCTTCCTTCCATTTCCGAAGATGCAATTGAAGAAGTGGC
CCAGGTACTTCGATCTGGTTGGGTGACTTCTGGACCAAAAGTAAAACAATTCGAGATGGAGTTTGGAGACTTTGTCGGTA
GCAAGGAAACCATTGCTGTGAACTCAGCCACTGCTGGCCTTCACTTATCACTTGAGGCAATTGGACTCACAGCGAATGAT
GCGGCCATCACAAGTTCGATCACCTTCACTGCCACAGCGGAAGTCATCTGTTACTTTGGAGCCGAACCAATTTTAACGGA
TGTGGATCCCATTCATAACTTAATGTCACCGGAAACCTTAGAGGCAACCATCAACACAAAGTGTATATGGAACGGGCATG
AACTCACGAGTAAAAAAACAGGCAAACATATCAAAGCCATCCTACCCGTCCACCTAGCAGGTTATACCTGTGATATGGAA
AATATCTTATCGATCGCAAAAAAATACAAACTTTATGTGATTGAAGATGCGGCACATGCATTCCCGGCCGTTCATAAAAA
TAAAATGATCGGAACCTGGGGAGATTTTACTGTTTTTAGTTTTTATGCAACGAAAGGGATCACAACAGGCGAAGGAGGGA
TGATCACCACCCCTCATAAAGATGCTGCAGAACGAATTCGTAGAATGCGTTTGCATGGAATCAATCGTGATGCTTTTAAT
CGACCTGGTTGGTACTATGAAGTTGTGGATGCAGGTTACAAATACAATATGACTGATATTGCTGCAGCACTTGGTGTTGT
TCAATTGAAAGAATCACATGGTTTTTGGGAACGTAGAACAGAGATCGCCAAACACTATAATGCTGAATTTGCCCTATTGA
AGGGAGTGAAACTTCCGAAAGAAGATGAAAATGGCATTCATAGTTGGCATTTGTACCGTATTGAAATTGATCCCAAAATT
GCAAAGATTGGAAGGGATACCTTAGTAGAAGAATTAAAGGAACGAAATATCGGCACAAGTTTACATTTTATTCCTATCTT
CGAACATCCTTATTACAAAAAAACCTATGGATTCCAAAGAAAAGATTACCCTAATGCATGTCAGATGTATGACAGATCGG
TTTCTCTTCCCTTGTTTGCCGGGATGACAAAAACAGATGAAAAAGATGTCATTGATGCAATGAAAGAATTACTTTCTTAA

Upstream 100 bases:

>100_bases
AACCTTGGGTGAAAATCCCTATTTAGCTTTGAATTTTCCCGTCGATAGGATGTTTGGGAGCGGAAAAGACTGGAAATTTT
TTCCGAATTATGTCGTATAA

Downstream 100 bases:

>100_bases
TCAAACCTTACTTACTTTGGCTTTGGCTTTGGCTAGAATTGATCCGGAATTCATAAAATTCTGGATCATAAAGTGAAAGT
AATTCCACAAGTCCTAAGAT

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MNMLTSRKTFLPFALPSISEDAIEEVAQVLRSGWVTSGPKVKQFEMEFGDFVGSKETIAVNSATAGLHLSLEAIGLTAND
AAITSSITFTATAEVICYFGAEPILTDVDPIHNLMSPETLEATINTKCIWNGHELTSKKTGKHIKAILPVHLAGYTCDME
NILSIAKKYKLYVIEDAAHAFPAVHKNKMIGTWGDFTVFSFYATKGITTGEGGMITTPHKDAAERIRRMRLHGINRDAFN
RPGWYYEVVDAGYKYNMTDIAAALGVVQLKESHGFWERRTEIAKHYNAEFALLKGVKLPKEDENGIHSWHLYRIEIDPKI
AKIGRDTLVEELKERNIGTSLHFIPIFEHPYYKKTYGFQRKDYPNACQMYDRSVSLPLFAGMTKTDEKDVIDAMKELLS

Sequences:

>Translated_399_residues
MNMLTSRKTFLPFALPSISEDAIEEVAQVLRSGWVTSGPKVKQFEMEFGDFVGSKETIAVNSATAGLHLSLEAIGLTAND
AAITSSITFTATAEVICYFGAEPILTDVDPIHNLMSPETLEATINTKCIWNGHELTSKKTGKHIKAILPVHLAGYTCDME
NILSIAKKYKLYVIEDAAHAFPAVHKNKMIGTWGDFTVFSFYATKGITTGEGGMITTPHKDAAERIRRMRLHGINRDAFN
RPGWYYEVVDAGYKYNMTDIAAALGVVQLKESHGFWERRTEIAKHYNAEFALLKGVKLPKEDENGIHSWHLYRIEIDPKI
AKIGRDTLVEELKERNIGTSLHFIPIFEHPYYKKTYGFQRKDYPNACQMYDRSVSLPLFAGMTKTDEKDVIDAMKELLS
>Mature_399_residues
MNMLTSRKTFLPFALPSISEDAIEEVAQVLRSGWVTSGPKVKQFEMEFGDFVGSKETIAVNSATAGLHLSLEAIGLTAND
AAITSSITFTATAEVICYFGAEPILTDVDPIHNLMSPETLEATINTKCIWNGHELTSKKTGKHIKAILPVHLAGYTCDME
NILSIAKKYKLYVIEDAAHAFPAVHKNKMIGTWGDFTVFSFYATKGITTGEGGMITTPHKDAAERIRRMRLHGINRDAFN
RPGWYYEVVDAGYKYNMTDIAAALGVVQLKESHGFWERRTEIAKHYNAEFALLKGVKLPKEDENGIHSWHLYRIEIDPKI
AKIGRDTLVEELKERNIGTSLHFIPIFEHPYYKKTYGFQRKDYPNACQMYDRSVSLPLFAGMTKTDEKDVIDAMKELLS

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=392, Percent_Identity=38.7755102040816, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI2367285, Length=397, Percent_Identity=27.455919395466, Blast_Score=137, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44811; Mature: 44811

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMLTSRKTFLPFALPSISEDAIEEVAQVLRSGWVTSGPKVKQFEMEFGDFVGSKETIAV
CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEE
NSATAGLHLSLEAIGLTANDAAITSSITFTATAEVICYFGAEPILTDVDPIHNLMSPETL
ECCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCE
EATINTKCIWNGHELTSKKTGKHIKAILPVHLAGYTCDMENILSIAKKYKLYVIEDAAHA
EEEECCEEEECCCHHCCCCCCCCEEEEEEEEECCEEECHHHHHHHHHHEEEEEEECCHHH
FPAVHKNKMIGTWGDFTVFSFYATKGITTGEGGMITTPHKDAAERIRRMRLHGINRDAFN
CCHHHCCCEEECCCCCEEEEEEHHCCEECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCC
RPGWYYEVVDAGYKYNMTDIAAALGVVQLKESHGFWERRTEIAKHYNAEFALLKGVKLPK
CCCCEEEEECCCCEECHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
EDENGIHSWHLYRIEIDPKIAKIGRDTLVEELKERNIGTSLHFIPIFEHPYYKKTYGFQR
CCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCC
KDYPNACQMYDRSVSLPLFAGMTKTDEKDVIDAMKELLS
CCCCCHHHHHCCCCCCHHEECCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNMLTSRKTFLPFALPSISEDAIEEVAQVLRSGWVTSGPKVKQFEMEFGDFVGSKETIAV
CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEE
NSATAGLHLSLEAIGLTANDAAITSSITFTATAEVICYFGAEPILTDVDPIHNLMSPETL
ECCCCCEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCE
EATINTKCIWNGHELTSKKTGKHIKAILPVHLAGYTCDMENILSIAKKYKLYVIEDAAHA
EEEECCEEEECCCHHCCCCCCCCEEEEEEEEECCEEECHHHHHHHHHHEEEEEEECCHHH
FPAVHKNKMIGTWGDFTVFSFYATKGITTGEGGMITTPHKDAAERIRRMRLHGINRDAFN
CCHHHCCCEEECCCCCEEEEEEHHCCEECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCC
RPGWYYEVVDAGYKYNMTDIAAALGVVQLKESHGFWERRTEIAKHYNAEFALLKGVKLPK
CCCCEEEEECCCCEECHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
EDENGIHSWHLYRIEIDPKIAKIGRDTLVEELKERNIGTSLHFIPIFEHPYYKKTYGFQR
CCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCC
KDYPNACQMYDRSVSLPLFAGMTKTDEKDVIDAMKELLS
CCCCCHHHHHCCCCCCHHEECCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]