| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219457
Identifier: 183219457
GI number: 183219457
Start: 30736
End: 31959
Strand: Reverse
Name: 183219457
Synonym: LEPBI_I0030
Alternate gene names: NA
Gene position: 31959-30736 (Counterclockwise)
Preceding gene: 183219458
Following gene: 183219450
Centisome position: 0.89
GC content: 35.05
Gene sequence:
>1224_bases ATGAAATCCTTAAAAAAGAAATTTAATCTTAGCTTTTTCATTATTCTTATTTTTCTCTGGATCAGTTCTCAAAACTGCCT GCATCAAAACTCGGATCAATATCTCTTTTGGACTGGGTATGATCATTTACAAAAATCCATCAAATCTACTGCAAAAAATG AAATCCATTTTTCAGCTCTTGCAGGTACTTTATCAGAAGAAAACGAATCCCAACTCTTAAAGAATTCTGATGGTTTTCCG ATTGTGACCCTAACTGGTAGAAAGGATCAAAACCAAAATTGGAGTATGCGTTGGTATGAATTTGAATCCAAAAATTACGA TTATTCTGCCAATGTGACTTTCACTCCCAAGTTATGGGTTGAAAAAGAAATATATGCAGTCGAACGAAAGATCATTCATA AACTCAATGGTTACCAACCTCGCGATTTTTTTAAATGGCTCAATGAATTTGCGATCGTGGTGAATGATCATAATGCCTAC CAAACTCTAAAATCCAAATCCAAAAATCTTCAATTCTTATGTGGAGTCATGTATTGCCACATCACAGAAACGGCGGAATG GCATACTCTTGAATTTACTTTGAATGACACAACGAAATCAAAATTCCCTGGATTTTACCAAAGGACAGGCTCTCGGTTAG AAAAGTCGAAACTGAATATTATGATTTGGGACAAGGCAAATCCCACTCACCGATTGAAGATCGCAAACCAAGGCAAAACA TTAGTTTTCCATTTTCCAGTGAACCCACCTAAGGATTATTTTCTGAATCCAAAAGAGATTCATTTTTTAGGAGATATTGA AATCCGATCCTTTGGAATTACGTTAAAAATTGAGAATCTAGAATACCGATTAAAAACAATTTTTGAAAAGAATACCGATA CTCTTCATGGAAATTTTTTACGCATTGGGAAAAAAGAAATTAACGGAAACTTTTTTTATGTGATCCCACAAGGTTTAGTC AATTTTATGATCCCAGGGAACATGGATGAATACTTCGATGAATTTTTTACCTTACTCATCCAAGGCACACAAGGCCGTGG GGGTTCTCAACTCCATGCAAAATTTGAAAAAACCAAACAAGGGCAGTTAAATACCATCACCACTTACAACGAAATCAAAC GGAAAAAATTCTCATTATTTGGAAACGATGATTCCCAAAAAGCAAGTAATGACTTTGATTTTTTTGCGGCTTGGGAAGAA GCAATGTTAGGTGACTTGAAATAG
Upstream 100 bases:
>100_bases ACACGAGGGGAAGTATACATCCGAATTTATAATAAATCGGGAAAACTTTTATCTTCTATTTACAAATCAGAAATAGAGGA AACACTCATCCAAGAAGTTT
Downstream 100 bases:
>100_bases ATGCGTTTGAGTCGAGAATTTCGATCATTTGATTTTGTAATCTATTTACCGATAGATAAAATTACGTAGTAATTCCTTCC CTTCTTCTGAGCCAAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKSLKKKFNLSFFIILIFLWISSQNCLHQNSDQYLFWTGYDHLQKSIKSTAKNEIHFSALAGTLSEENESQLLKNSDGFP IVTLTGRKDQNQNWSMRWYEFESKNYDYSANVTFTPKLWVEKEIYAVERKIIHKLNGYQPRDFFKWLNEFAIVVNDHNAY QTLKSKSKNLQFLCGVMYCHITETAEWHTLEFTLNDTTKSKFPGFYQRTGSRLEKSKLNIMIWDKANPTHRLKIANQGKT LVFHFPVNPPKDYFLNPKEIHFLGDIEIRSFGITLKIENLEYRLKTIFEKNTDTLHGNFLRIGKKEINGNFFYVIPQGLV NFMIPGNMDEYFDEFFTLLIQGTQGRGGSQLHAKFEKTKQGQLNTITTYNEIKRKKFSLFGNDDSQKASNDFDFFAAWEE AMLGDLK
Sequences:
>Translated_407_residues MKSLKKKFNLSFFIILIFLWISSQNCLHQNSDQYLFWTGYDHLQKSIKSTAKNEIHFSALAGTLSEENESQLLKNSDGFP IVTLTGRKDQNQNWSMRWYEFESKNYDYSANVTFTPKLWVEKEIYAVERKIIHKLNGYQPRDFFKWLNEFAIVVNDHNAY QTLKSKSKNLQFLCGVMYCHITETAEWHTLEFTLNDTTKSKFPGFYQRTGSRLEKSKLNIMIWDKANPTHRLKIANQGKT LVFHFPVNPPKDYFLNPKEIHFLGDIEIRSFGITLKIENLEYRLKTIFEKNTDTLHGNFLRIGKKEINGNFFYVIPQGLV NFMIPGNMDEYFDEFFTLLIQGTQGRGGSQLHAKFEKTKQGQLNTITTYNEIKRKKFSLFGNDDSQKASNDFDFFAAWEE AMLGDLK >Mature_407_residues MKSLKKKFNLSFFIILIFLWISSQNCLHQNSDQYLFWTGYDHLQKSIKSTAKNEIHFSALAGTLSEENESQLLKNSDGFP IVTLTGRKDQNQNWSMRWYEFESKNYDYSANVTFTPKLWVEKEIYAVERKIIHKLNGYQPRDFFKWLNEFAIVVNDHNAY QTLKSKSKNLQFLCGVMYCHITETAEWHTLEFTLNDTTKSKFPGFYQRTGSRLEKSKLNIMIWDKANPTHRLKIANQGKT LVFHFPVNPPKDYFLNPKEIHFLGDIEIRSFGITLKIENLEYRLKTIFEKNTDTLHGNFLRIGKKEINGNFFYVIPQGLV NFMIPGNMDEYFDEFFTLLIQGTQGRGGSQLHAKFEKTKQGQLNTITTYNEIKRKKFSLFGNDDSQKASNDFDFFAAWEE AMLGDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47736; Mature: 47736
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLKKKFNLSFFIILIFLWISSQNCLHQNSDQYLFWTGYDHLQKSIKSTAKNEIHFSAL CCCHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEH AGTLSEENESQLLKNSDGFPIVTLTGRKDQNQNWSMRWYEFESKNYDYSANVTFTPKLWV HCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEE EKEIYAVERKIIHKLNGYQPRDFFKWLNEFAIVVNDHNAYQTLKSKSKNLQFLCGVMYCH CHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCEEEEEEEEEE ITETAEWHTLEFTLNDTTKSKFPGFYQRTGSRLEKSKLNIMIWDKANPTHRLKIANQGKT EECCCCEEEEEEEECCCCCCCCCCHHHHHCCHHHHCCCEEEEEECCCCCEEEEEECCCCE LVFHFPVNPPKDYFLNPKEIHFLGDIEIRSFGITLKIENLEYRLKTIFEKNTDTLHGNFL EEEEECCCCCHHHCCCCCEEEEEECEEEEEEEEEEEECCCCEEEHHHHHCCCCCCCCCEE RIGKKEINGNFFYVIPQGLVNFMIPGNMDEYFDEFFTLLIQGTQGRGGSQLHAKFEKTKQ EECCEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCC GQLNTITTYNEIKRKKFSLFGNDDSQKASNDFDFFAAWEEAMLGDLK CCCEEEECHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKSLKKKFNLSFFIILIFLWISSQNCLHQNSDQYLFWTGYDHLQKSIKSTAKNEIHFSAL CCCHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEH AGTLSEENESQLLKNSDGFPIVTLTGRKDQNQNWSMRWYEFESKNYDYSANVTFTPKLWV HCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEE EKEIYAVERKIIHKLNGYQPRDFFKWLNEFAIVVNDHNAYQTLKSKSKNLQFLCGVMYCH CHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCEEEEEEEEEE ITETAEWHTLEFTLNDTTKSKFPGFYQRTGSRLEKSKLNIMIWDKANPTHRLKIANQGKT EECCCCEEEEEEEECCCCCCCCCCHHHHHCCHHHHCCCEEEEEECCCCCEEEEEECCCCE LVFHFPVNPPKDYFLNPKEIHFLGDIEIRSFGITLKIENLEYRLKTIFEKNTDTLHGNFL EEEEECCCCCHHHCCCCCEEEEEECEEEEEEEEEEEECCCCEEEHHHHHCCCCCCCCCEE RIGKKEINGNFFYVIPQGLVNFMIPGNMDEYFDEFFTLLIQGTQGRGGSQLHAKFEKTKQ EECCEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCC GQLNTITTYNEIKRKKFSLFGNDDSQKASNDFDFFAAWEEAMLGDLK CCCEEEECHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA