| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is bgaB [H]
Identifier: 183219451
GI number: 183219451
Start: 24122
End: 26104
Strand: Direct
Name: bgaB [H]
Synonym: LEPBI_I0024
Alternate gene names: 183219451
Gene position: 24122-26104 (Clockwise)
Preceding gene: 183219446
Following gene: 183219452
Centisome position: 0.67
GC content: 41.35
Gene sequence:
>1983_bases ATGATCTTTGGAGCCTGTTATTACCCAGAACAATGGAACCCTAAGGACTGGGATGAAGACCTAAAAATGATGAAAGAGAT GGGTCTTTCGTCTGTTCGCCTTGCAGAATTTGCATGGGGGATCATGGAACCCAAAGAAGGGAAATTTGATTTTTCTCTCT TCGATGCAATCTTAGAAAAAATTCAAAAGCAGGGGATGACTGCCATCCTCGGTACACCAACGGCCACATTTCCTCCTTGG TTGTACCAAAAATTTCCAGAAATTGTACAGATTTCCAAAGAAGGAATCATTCGTGGGATTGGAACAAGGCGACAAGCTTG TTTTTCCTCACCCGCATACAAAAAAGCTACCGAACGCATTGTGACAGCAATGGCAAAACACTTTGGGAACCACCCCGCGG TTGTAGGTTGGCAAATTGACAATGAACCAGGCCATGAAGGTTCCGATGTGGATTATTCCCCACTGGCTGAAAAAAATTTC CGAATATGGCTGAAGACAAAATATAAAACTCTCGATTCGCTTAACAAACGTTGGGGGAATGTCTTTTGGGGAGTGATCTA TTCTGACTGGAATCAGATTCCCTTACCAGGTGCGCATGTGGCGAGTAATTTTAACCCAGCCATGATCCAGGACTATTATC GTTTCCAATCTGATGAGTTGGTTTCTTACATTCATTTCCAAGCAGAAATTTTACGAAAATATAGCAAAGGAAAACCACTC ACGACCAATTTATACCCATCGCCATTTTTGCCTGTGACAGATATGTACGAAATGTTCAAAAAATTGGACTACGTATCTTG GGACAATTACCCTGTTTGGGGGAACCAACAAGAGCCTTACCCACATCCTCTTGTCACTGCCACGCAACAATACTCACGCG GTCTAAAAGACAAACCATATACAGTGATGGAACAATTCTCAGGTGTACAAGGGCATGATACATTAGGTTACCTTCCACCT CCTGGTCAAATTGGGCTTTGGTTGACACAAGCAATTGTGAATGGAGCCAACCAAATCTATTTTTTCCGTTACCGAACGGC TCGCTTTGGACAAGAACAACTTTGTTATGGAATTTTAGATCATGGCAAACGAAAGACATCCAAATACTTTGAATTGAAAA AAACCATCGAAGAAATCAAAGAATTTGCAGAAGACATCGCTGCTTCGCCTTACCCAGCGAAGGTTGCCATTTTACATGAC ATTGAAAATTCAAGAAACTACAAACACCAACCTTTGAGTGATGGACTGAAGTTTTCACCAGTTCCTTTTGCACAAGTGGG TTATGACATAGAACTTGCCACCTGGTTTGCTGGCACTAATGTACTGAATGTCAACACTCACTCTTTGCCAATCCAAAGAG AACAGGATTGGTCAAATTACAAAGTTCTCACTCTTCCTTTATACACGATGTTTGGTCCAGAGATTGTAGAAAAATTAAAG GCCTATGTACAAGAAGGGGGAACCTTGGTTCTAGGATACCGATCGGGAATCAAAGACAAAGACCATTGGATGGTGGAAGA ACCAGTCCCTGGAGTGTTTTCAGAAATGGCAGGCGTGGAAGTATTTCAATTTGAAGCACCTGCGACAGATAAGGTGGGAA TCAAAATGGGGATTTGGCCACTCAAAGGATCCAAATTTTGTGAAATCTTAGAACCAACCTCAGCCAAAGTGATCGCACGT TACCGTGATAAAAAGAAATTTTATTCAGGTAAACCTGCTATCACAGTGAATTCCTTTGGGAAAGGAAAAGTCTATTATGT AGGCACTTCTTTAACACCAGAAAGTTTTGTCCTCTTGTATCGAAAAATACTGAAAGGAGCCGGTATTCCTTTTGGTTTCC TTGGAGCTACGATCGAAAGGCATTTTCGAGAGGGGAAAAAATACAATTATGAAATCACGATGAACCATTCGAATCAATAT AAATTGGCTGGTTTTTCGGTATTAAAGCCGTTTGGGTATCAAATCAAACGGATCCAGAAATAA
Upstream 100 bases:
>100_bases TTCCTAAAATAACTTGGTCAGACATTATTTGATTGAAAGAGGTGTTTTCTGATTCAGTCTGTGTCACAAGATAGATTCTG CAATCGCAAAAAGGAAAAAT
Downstream 100 bases:
>100_bases GATCTCAATTGAAAATAATAAATGAAAATACAAGAATATAAATCCATCAATCGATTGTTAGGAGAGTTTTCGACAAAAAA CAAAGTAGGAGAAATCTTTG
Product: beta-galactosidase
Products: NA
Alternate protein names: Beta-gal; Beta-galactosidase I; Lactase [H]
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MIFGACYYPEQWNPKDWDEDLKMMKEMGLSSVRLAEFAWGIMEPKEGKFDFSLFDAILEKIQKQGMTAILGTPTATFPPW LYQKFPEIVQISKEGIIRGIGTRRQACFSSPAYKKATERIVTAMAKHFGNHPAVVGWQIDNEPGHEGSDVDYSPLAEKNF RIWLKTKYKTLDSLNKRWGNVFWGVIYSDWNQIPLPGAHVASNFNPAMIQDYYRFQSDELVSYIHFQAEILRKYSKGKPL TTNLYPSPFLPVTDMYEMFKKLDYVSWDNYPVWGNQQEPYPHPLVTATQQYSRGLKDKPYTVMEQFSGVQGHDTLGYLPP PGQIGLWLTQAIVNGANQIYFFRYRTARFGQEQLCYGILDHGKRKTSKYFELKKTIEEIKEFAEDIAASPYPAKVAILHD IENSRNYKHQPLSDGLKFSPVPFAQVGYDIELATWFAGTNVLNVNTHSLPIQREQDWSNYKVLTLPLYTMFGPEIVEKLK AYVQEGGTLVLGYRSGIKDKDHWMVEEPVPGVFSEMAGVEVFQFEAPATDKVGIKMGIWPLKGSKFCEILEPTSAKVIAR YRDKKKFYSGKPAITVNSFGKGKVYYVGTSLTPESFVLLYRKILKGAGIPFGFLGATIERHFREGKKYNYEITMNHSNQY KLAGFSVLKPFGYQIKRIQK
Sequences:
>Translated_660_residues MIFGACYYPEQWNPKDWDEDLKMMKEMGLSSVRLAEFAWGIMEPKEGKFDFSLFDAILEKIQKQGMTAILGTPTATFPPW LYQKFPEIVQISKEGIIRGIGTRRQACFSSPAYKKATERIVTAMAKHFGNHPAVVGWQIDNEPGHEGSDVDYSPLAEKNF RIWLKTKYKTLDSLNKRWGNVFWGVIYSDWNQIPLPGAHVASNFNPAMIQDYYRFQSDELVSYIHFQAEILRKYSKGKPL TTNLYPSPFLPVTDMYEMFKKLDYVSWDNYPVWGNQQEPYPHPLVTATQQYSRGLKDKPYTVMEQFSGVQGHDTLGYLPP PGQIGLWLTQAIVNGANQIYFFRYRTARFGQEQLCYGILDHGKRKTSKYFELKKTIEEIKEFAEDIAASPYPAKVAILHD IENSRNYKHQPLSDGLKFSPVPFAQVGYDIELATWFAGTNVLNVNTHSLPIQREQDWSNYKVLTLPLYTMFGPEIVEKLK AYVQEGGTLVLGYRSGIKDKDHWMVEEPVPGVFSEMAGVEVFQFEAPATDKVGIKMGIWPLKGSKFCEILEPTSAKVIAR YRDKKKFYSGKPAITVNSFGKGKVYYVGTSLTPESFVLLYRKILKGAGIPFGFLGATIERHFREGKKYNYEITMNHSNQY KLAGFSVLKPFGYQIKRIQK >Mature_660_residues MIFGACYYPEQWNPKDWDEDLKMMKEMGLSSVRLAEFAWGIMEPKEGKFDFSLFDAILEKIQKQGMTAILGTPTATFPPW LYQKFPEIVQISKEGIIRGIGTRRQACFSSPAYKKATERIVTAMAKHFGNHPAVVGWQIDNEPGHEGSDVDYSPLAEKNF RIWLKTKYKTLDSLNKRWGNVFWGVIYSDWNQIPLPGAHVASNFNPAMIQDYYRFQSDELVSYIHFQAEILRKYSKGKPL TTNLYPSPFLPVTDMYEMFKKLDYVSWDNYPVWGNQQEPYPHPLVTATQQYSRGLKDKPYTVMEQFSGVQGHDTLGYLPP PGQIGLWLTQAIVNGANQIYFFRYRTARFGQEQLCYGILDHGKRKTSKYFELKKTIEEIKEFAEDIAASPYPAKVAILHD IENSRNYKHQPLSDGLKFSPVPFAQVGYDIELATWFAGTNVLNVNTHSLPIQREQDWSNYKVLTLPLYTMFGPEIVEKLK AYVQEGGTLVLGYRSGIKDKDHWMVEEPVPGVFSEMAGVEVFQFEAPATDKVGIKMGIWPLKGSKFCEILEPTSAKVIAR YRDKKKFYSGKPAITVNSFGKGKVYYVGTSLTPESFVLLYRKILKGAGIPFGFLGATIERHFREGKKYNYEITMNHSNQY KLAGFSVLKPFGYQIKRIQK
Specific function: Unknown
COG id: COG1874
COG function: function code G; Beta-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 42 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013739 - InterPro: IPR013738 - InterPro: IPR003476 - InterPro: IPR013529 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02449 Glyco_hydro_42; PF08533 Glyco_hydro_42C; PF08532 Glyco_hydro_42M [H]
EC number: =3.2.1.23 [H]
Molecular weight: Translated: 75647; Mature: 75647
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGACYYPEQWNPKDWDEDLKMMKEMGLSSVRLAEFAWGIMEPKEGKFDFSLFDAILEK CEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IQKQGMTAILGTPTATFPPWLYQKFPEIVQISKEGIIRGIGTRRQACFSSPAYKKATERI HHHCCCEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH VTAMAKHFGNHPAVVGWQIDNEPGHEGSDVDYSPLAEKNFRIWLKTKYKTLDSLNKRWGN HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC VFWGVIYSDWNQIPLPGAHVASNFNPAMIQDYYRFQSDELVSYIHFQAEILRKYSKGKPL EEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE TTNLYPSPFLPVTDMYEMFKKLDYVSWDNYPVWGNQQEPYPHPLVTATQQYSRGLKDKPY EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH TVMEQFSGVQGHDTLGYLPPPGQIGLWLTQAIVNGANQIYFFRYRTARFGQEQLCYGILD HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECHHCCHHHHHHHHHH HGKRKTSKYFELKKTIEEIKEFAEDIAASPYPAKVAILHDIENSRNYKHQPLSDGLKFSP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC VPFAQVGYDIELATWFAGTNVLNVNTHSLPIQREQDWSNYKVLTLPLYTMFGPEIVEKLK CCHHHHCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCCHHHHHHHH AYVQEGGTLVLGYRSGIKDKDHWMVEEPVPGVFSEMAGVEVFQFEAPATDKVGIKMGIWP HHHHCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHCCCEEEEECCCCCCCCCEEEEEEE LKGSKFCEILEPTSAKVIARYRDKKKFYSGKPAITVNSFGKGKVYYVGTSLTPESFVLLY CCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHH RKILKGAGIPFGFLGATIERHFREGKKYNYEITMNHSNQYKLAGFSVLKPFGYQIKRIQK HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCHHHHCCCCHHHHHHCC >Mature Secondary Structure MIFGACYYPEQWNPKDWDEDLKMMKEMGLSSVRLAEFAWGIMEPKEGKFDFSLFDAILEK CEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IQKQGMTAILGTPTATFPPWLYQKFPEIVQISKEGIIRGIGTRRQACFSSPAYKKATERI HHHCCCEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH VTAMAKHFGNHPAVVGWQIDNEPGHEGSDVDYSPLAEKNFRIWLKTKYKTLDSLNKRWGN HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC VFWGVIYSDWNQIPLPGAHVASNFNPAMIQDYYRFQSDELVSYIHFQAEILRKYSKGKPL EEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCE TTNLYPSPFLPVTDMYEMFKKLDYVSWDNYPVWGNQQEPYPHPLVTATQQYSRGLKDKPY EECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH TVMEQFSGVQGHDTLGYLPPPGQIGLWLTQAIVNGANQIYFFRYRTARFGQEQLCYGILD HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECHHCCHHHHHHHHHH HGKRKTSKYFELKKTIEEIKEFAEDIAASPYPAKVAILHDIENSRNYKHQPLSDGLKFSP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC VPFAQVGYDIELATWFAGTNVLNVNTHSLPIQREQDWSNYKVLTLPLYTMFGPEIVEKLK CCHHHHCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHCCHHHHHHHH AYVQEGGTLVLGYRSGIKDKDHWMVEEPVPGVFSEMAGVEVFQFEAPATDKVGIKMGIWP HHHHCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHCCCEEEEECCCCCCCCCEEEEEEE LKGSKFCEILEPTSAKVIARYRDKKKFYSGKPAITVNSFGKGKVYYVGTSLTPESFVLLY CCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHH RKILKGAGIPFGFLGATIERHFREGKKYNYEITMNHSNQYKLAGFSVLKPFGYQIKRIQK HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3086288 [H]