| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is adk
Identifier: 18311366
GI number: 18311366
Start: 2741335
End: 2741991
Strand: Reverse
Name: adk
Synonym: CPE2384
Alternate gene names: 18311366
Gene position: 2741991-2741335 (Counterclockwise)
Preceding gene: 18311367
Following gene: 18311365
Centisome position: 90.45
GC content: 33.33
Gene sequence:
>657_bases ATGCCCGTGAAGATAGTTTTATTAGGTCCTCCTGGAGCAGGAAAAGGAACACAGGCAAAATCAATTAGTAATAGATATTC AATTCCTCACATATCTACAGGAGATATCTTTAGAAAAAATATTTCAGAGAATACTCCTTTAGGTATTGAGGCTAAATCAT ACATGGATAATGGACAGTTAGTTCCAGATGAAGTAACTATCAACATGGTAAAAGATAGACTTCAACAAGATGATTGTAAG AACGGATATTTATTAGATGGTTTCCCAAGAACAGTTCATCAAGCAGAAGCTTTAGATAACTTCTTAACTGAAAGAGAAGA GTCAATAGACACAGCTCTTTTAATAGAAGTACCTAAAGAATTTATACTTGAAAGAATGACAGGAAGAAGAGTTTGTCCTT CATGTGGAGCAAGTTATCACATAAAGTTTAATCCACCAACTAATGATGGAAAATGTGATCTTTGCGGATCAGATGTTATT CAAAGAAAAGATGACACTGAAGAAACAGTTAAGGAAAGACTTGATGTGTATGAAAATCAAACACAACCATTAATTGATTT TTATAAAAACAAAAAGCAACTTTCAGTAGTAGATGGAACACAAGCAATAAACGAGGTCTTTGAGAGTATCTGTAAAATAT TAGGGAGCGACAAGTAA
Upstream 100 bases:
>100_bases TAGTTTCTGTTTCATTAGAAATAATGAGACAATTAGAATCTCAATTAACAATGAGACATTACCAAGGATTCTTAAAATAG AAATACAAGTTATGGAGATG
Downstream 100 bases:
>100_bases TGATAATTCTTAAGAATGAGAATGAAATCGACCTAATGAGGAAAGCAGGAAAGATTCTTGGAGAGACACTTAACCTGCTT AAGGAGAAAGTAAGACCTGG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPVKIVLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCK NGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVI QRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK
Sequences:
>Translated_218_residues MPVKIVLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCK NGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVI QRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK >Mature_217_residues PVKIVLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQLVPDEVTINMVKDRLQQDDCKN GYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQ RKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=208, Percent_Identity=43.2692307692308, Blast_Score=201, Evalue=3e-52, Organism=Homo sapiens, GI4502013, Length=208, Percent_Identity=43.2692307692308, Blast_Score=201, Evalue=4e-52, Organism=Homo sapiens, GI19923437, Length=212, Percent_Identity=40.0943396226415, Blast_Score=175, Evalue=4e-44, Organism=Homo sapiens, GI310110345, Length=214, Percent_Identity=34.1121495327103, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI53832003, Length=214, Percent_Identity=34.1121495327103, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI8051579, Length=214, Percent_Identity=34.1121495327103, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI53832001, Length=214, Percent_Identity=34.1121495327103, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI4502011, Length=212, Percent_Identity=30.6603773584906, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI22749187, Length=208, Percent_Identity=28.3653846153846, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI7706497, Length=218, Percent_Identity=26.605504587156, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI28144899, Length=220, Percent_Identity=25.9090909090909, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI28144897, Length=220, Percent_Identity=25.9090909090909, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI237858799, Length=131, Percent_Identity=32.0610687022901, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786680, Length=218, Percent_Identity=47.7064220183486, Blast_Score=209, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17552384, Length=213, Percent_Identity=38.4976525821596, Blast_Score=179, Evalue=8e-46, Organism=Caenorhabditis elegans, GI17537943, Length=217, Percent_Identity=26.2672811059908, Blast_Score=116, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17567503, Length=207, Percent_Identity=27.536231884058, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17533833, Length=211, Percent_Identity=24.6445497630332, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI25147457, Length=214, Percent_Identity=24.7663551401869, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=216, Percent_Identity=45.3703703703704, Blast_Score=212, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6321018, Length=195, Percent_Identity=37.4358974358974, Blast_Score=138, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6322828, Length=209, Percent_Identity=26.3157894736842, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI22026816, Length=212, Percent_Identity=41.0377358490566, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI17737899, Length=198, Percent_Identity=37.8787878787879, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI24645822, Length=198, Percent_Identity=37.8787878787879, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI221459597, Length=214, Percent_Identity=29.9065420560748, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI21356893, Length=214, Percent_Identity=29.9065420560748, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24663208, Length=188, Percent_Identity=25, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI17647141, Length=188, Percent_Identity=25, Blast_Score=84, Evalue=6e-17,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_CLOPE (Q8XHU4)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563300.1 - ProteinModelPortal: Q8XHU4 - SMR: Q8XHU4 - GeneID: 990745 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2384 - NMPDR: fig|195102.1.peg.2447 - HOGENOM: HBG630208 - OMA: EINQPLE - PhylomeDB: Q8XHU4 - ProtClustDB: PRK00279 - BioCyc: CPER195102:CPE2384-MONOMER - BRENDA: 2.7.4.3 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 24383; Mature: 24252
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKIVLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQL CCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCC VPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKE CCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH FILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQ HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCC TQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVKIVLLGPPGAGKGTQAKSISNRYSIPHISTGDIFRKNISENTPLGIEAKSYMDNGQL CEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCCCCCC VPDEVTINMVKDRLQQDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKE CCHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH FILERMTGRRVCPSCGASYHIKFNPPTNDGKCDLCGSDVIQRKDDTEETVKERLDVYENQ HHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCC TQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK CCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842