| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311293
Identifier: 18311293
GI number: 18311293
Start: 2657979
End: 2658689
Strand: Reverse
Name: 18311293
Synonym: CPE2311
Alternate gene names: NA
Gene position: 2658689-2657979 (Counterclockwise)
Preceding gene: 18311295
Following gene: 18311292
Centisome position: 87.7
GC content: 25.74
Gene sequence:
>711_bases ATGAAATTTAAAAAAATTTTTTTATGCCTTATGTCATTACTTCTTATTTTTTCTACTGTAGTTTTAGGAGAAGAAATAAA TAAAATAGAAGTTATAGAAAAATCTATAGAAGAAAATACTGAAAAGTATGAAATTAAAGTTAAATATCCATCAATTCAAG GTGGAGAAAAAGAGGTTACAGATAAAATAAATAAAACTATAGAGGATTATACTTTAAATTGGATAAATGACATTAAGTTA TTAGGAGAAGAGTACAGCAAAGAATATGAAAAGGCAGGAAAAGAAATGCCTAAAATGGAGGCATATAGTCTTTTTGAAGC ATTTAATACAGATGAAGTAATTAGTTTACCTGTTTCATATTATCAATATACTGGTGGAGCTCATGGATTAACGACTAAAG TAAGTTATAATTATAACCTTAAAACAGGAAAAGAGCTTAAATTAAAAGATTTGTTTAAAGAAGGATTTGACTATAAAAGT ATAATTGATAAAAAGGTAAGAGGGGATATTGAAAAAGAGAAGGAGCTTTATTTTGATAATGGAGCTTTGTTTAAGGGAGT TAATGAAAATCAAGCCTATTATTTAAATAGAGATGGAATTATAGTGTATTTTCAACAATATGAAATTGCTCCATACTCTT CAGGGATTAGAGAATTTAAAATTCCTTATGGAGAATTAAAGGAAGGATTAATTTATAAATTAGGAAATTAA
Upstream 100 bases:
>100_bases CTCCAATCAGCTTTTAATAGATTTTATTTATACATTATACATAATTATAACACTTAAGAGAAAAATAAAATTAGCCAAAT ATAAAGTGGAGGTTTATTTT
Downstream 100 bases:
>100_bases TATTAAGAGCGTGTATCAAAGTATATTTATTATTAAATTTTGATACACGCTTTTTATGATTAAATTTAAAAGGATATATT TTATTATTAAATAAAATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKFKKIFLCLMSLLLIFSTVVLGEEINKIEVIEKSIEENTEKYEIKVKYPSIQGGEKEVTDKINKTIEDYTLNWINDIKL LGEEYSKEYEKAGKEMPKMEAYSLFEAFNTDEVISLPVSYYQYTGGAHGLTTKVSYNYNLKTGKELKLKDLFKEGFDYKS IIDKKVRGDIEKEKELYFDNGALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPYGELKEGLIYKLGN
Sequences:
>Translated_236_residues MKFKKIFLCLMSLLLIFSTVVLGEEINKIEVIEKSIEENTEKYEIKVKYPSIQGGEKEVTDKINKTIEDYTLNWINDIKL LGEEYSKEYEKAGKEMPKMEAYSLFEAFNTDEVISLPVSYYQYTGGAHGLTTKVSYNYNLKTGKELKLKDLFKEGFDYKS IIDKKVRGDIEKEKELYFDNGALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPYGELKEGLIYKLGN >Mature_236_residues MKFKKIFLCLMSLLLIFSTVVLGEEINKIEVIEKSIEENTEKYEIKVKYPSIQGGEKEVTDKINKTIEDYTLNWINDIKL LGEEYSKEYEKAGKEMPKMEAYSLFEAFNTDEVISLPVSYYQYTGGAHGLTTKVSYNYNLKTGKELKLKDLFKEGFDYKS IIDKKVRGDIEKEKELYFDNGALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPYGELKEGLIYKLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27449; Mature: 27449
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKKIFLCLMSLLLIFSTVVLGEEINKIEVIEKSIEENTEKYEIKVKYPSIQGGEKEVT CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH DKINKTIEDYTLNWINDIKLLGEEYSKEYEKAGKEMPKMEAYSLFEAFNTDEVISLPVSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCHHH YQYTGGAHGLTTKVSYNYNLKTGKELKLKDLFKEGFDYKSIIDKKVRGDIEKEKELYFDN HEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEEECC GALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPYGELKEGLIYKLGN CCEEECCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEECCCHHHHCCCCEEECCC >Mature Secondary Structure MKFKKIFLCLMSLLLIFSTVVLGEEINKIEVIEKSIEENTEKYEIKVKYPSIQGGEKEVT CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH DKINKTIEDYTLNWINDIKLLGEEYSKEYEKAGKEMPKMEAYSLFEAFNTDEVISLPVSY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEECCHHH YQYTGGAHGLTTKVSYNYNLKTGKELKLKDLFKEGFDYKSIIDKKVRGDIEKEKELYFDN HEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHEEECC GALFKGVNENQAYYLNRDGIIVYFQQYEIAPYSSGIREFKIPYGELKEGLIYKLGN CCEEECCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEECCCHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA