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The map label for this gene is cadC [H]

Identifier: 18311286

GI number: 18311286

Start: 2650104

End: 2650463

Strand: Reverse

Name: cadC [H]

Synonym: CPE2304

Alternate gene names: 18311286

Gene position: 2650463-2650104 (Counterclockwise)

Preceding gene: 18311287

Following gene: 18311285

Centisome position: 87.43

GC content: 28.89

Gene sequence:

>360_bases
ATGGATAATAATAAAATAGAAAGTTGTAACTGTTCTTATATCCATGAAGATATATTAAGTAGGGTAAAAGAACATTTGCC
AAAGGAAGAAGTACTTTATGAATTAGCAGAAATATTTAAAGTTTTTGGAGATTCAACAAGAATAAAAATTTTATGTGCCC
TTTTTGAAGGAGAAATGTGTGTATGTGATATGGCTGAATTATTAGGTGTAAGTCAATCAGCAGTGTCTCATCAATTGAGA
GTTTTAAAACAAGCTAGGCTAGTTAAGTTTAGAAGAGAAGGTAAGATAGTTTACTATTCTTTAGATGATGATCATGTTAA
ACACATATTCAATGAAGGTTTAAATCACGTTTTAGAGTAA

Upstream 100 bases:

>100_bases
GGTCTTTTTTTAGTTGCATTTTTTGTAAAAGAGACATATAATAAAAGTGAACATATGAACAGATGCTCATATGTAAAAAT
GAATAATAGGAGTTAAGAAT

Downstream 100 bases:

>100_bases
AGGAGGTATTTAGACATGAAAGATATAAAGCTTTATTTAGACGGCTTAAACTGTGCAAACTGTGCTGGGAAAATTGAAGA
TAAAGTTAATAAACTTACTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMCVCDMAELLGVSQSAVSHQLR
VLKQARLVKFRREGKIVYYSLDDDHVKHIFNEGLNHVLE

Sequences:

>Translated_119_residues
MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMCVCDMAELLGVSQSAVSHQLR
VLKQARLVKFRREGKIVYYSLDDDHVKHIFNEGLNHVLE
>Mature_119_residues
MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMCVCDMAELLGVSQSAVSHQLR
VLKQARLVKFRREGKIVYYSLDDDHVKHIFNEGLNHVLE

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13784; Mature: 13784

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMC
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCH
VCDMAELLGVSQSAVSHQLRVLKQARLVKFRREGKIVYYSLDDDHVKHIFNEGLNHVLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNNKIESCNCSYIHEDILSRVKEHLPKEEVLYELAEIFKVFGDSTRIKILCALFEGEMC
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEHHCCCCH
VCDMAELLGVSQSAVSHQLRVLKQARLVKFRREGKIVYYSLDDDHVKHIFNEGLNHVLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA