Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311265

Identifier: 18311265

GI number: 18311265

Start: 2627000

End: 2628154

Strand: Reverse

Name: 18311265

Synonym: CPE2283

Alternate gene names: NA

Gene position: 2628154-2627000 (Counterclockwise)

Preceding gene: 18311266

Following gene: 18311264

Centisome position: 86.7

GC content: 27.45

Gene sequence:

>1155_bases
TTGGCAATAGAAAATAAAGAGAAGAAGAGCATATTGCAGATGAATGTTTCTGATATACTTAAGGCTCTTAAGAAGAAAAA
TTCTGAGAAAAAGAATGATAAAAAAGGGAGTAAGAAAAAAGCTAAGAGTGTTATATGTAAAAAAACTATTTCTATTGATA
TTGGAAGTGAGAATACAAAGATTATTGTTGGGAGATATCATAAAAATAAGGTTATTATAGACAAGGCTTTTTCTTTTAAG
ACTCCAAAAGATGGTATAGATGATGGTCATATTAAGGATATAGATAGTTTGGCTAGAGCTATTACTGATGCTTTGGATTC
TAATAATGTTAAGAATGATAATGTAATTTTTACTACAAACAGCACTTCTGTTATAAATAGAACAATTATTATTCCAAAGG
TTAATGAGGATGAAATAGAATCAGTTATTAAGTACGAAGTTCAGCAATATCTTCCTATAAACTTAGAGGATCATATGATT
CAATATAATGTTTTAGAGGAAAAGGTTATTGATGGGAATGAAAAGCTAGAGGTTTTAATTGTAGTTTATCCTAATAAGAT
GGTTTATTCCTATGCAGAGCTTATTAATAAAATTGGTAGAAAACCATATGCTTTAGATTTAAATTATAATTCTAAAAGAA
AAGCTTATTACGTAATGAATCCTGAAATAAGGGAGTCTATTTTAAGTATTGATATGGGAGCAGAAAATATAGCATTAACA
ATAATGAAAGACAATGAGTTAATACTTATAAAAACTACAAAATCTGGTGGGAATTATTTAAATAGTAAAATATCAAAGGT
CTTAGAAATTTCATTAGAAAATGCAGAGATGCAAAAGAGAGAAAATTGTAATTTGATGAATAGAGAAGAAGGGCCTTTAG
AGCATGTTGTTAGAGAGGTTGTAGATTCTTGGTTTGATGAAGCAAGTAGAATAATTAAATATTATAAAAGTAAAAATACT
CAAAATAATATAGATAAGATATATATTTGTGGAGGAAGTTCAAACATAAAGGGACTAGAAAGATATGTATCTACTAAACT
AAACATGAAAGTAAAGATAGTTCAGGGAAATAGTAATATAGAATTTAAAAAAGGCGTTGAAGAAGTGAATATTTCAGAAT
ACATAAACGCTATTGGAGCCTTAATAAGACTTTAG

Upstream 100 bases:

>100_bases
TATTAGTAAAATAATAAGGTGATTTTTTAATTATAATGAAAAAAGTGTAAGGAATTTTTTCCTTGCACTTTTCAACTATA
AAGGTAAAGGAGGGAAAGTT

Downstream 100 bases:

>100_bases
GTTGGTGATAAATAATGAGAGATTTTAACTTTTTCTCCCATATAACTGAGGAAAGAAAAAGTGATTCAAAAAGAAAATAC
ATAGGATTTGGATTAATTGG

Product: type IV pilus assembly protein PilM

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein ATPase PilM; Type Iv Pilus Assembly Protein Pilm; Type IV Pilus Biogenesis Protein PilM; Protein FtsA; Fimbrial Assembly Protein; Tfp Pilus Assembly Protein; Fimbrial Assembly Protein PilM; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Type 4 Fimbrial Biogenesis Protein PilM; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein ATPase PilM-Like Protein Protein; Type 4 Fimbrial Biogenesis Protein; Competence Protein PilM; Type IV Pilus Biogenesis ATPase PilM

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MAIENKEKKSILQMNVSDILKALKKKNSEKKNDKKGSKKKAKSVICKKTISIDIGSENTKIIVGRYHKNKVIIDKAFSFK
TPKDGIDDGHIKDIDSLARAITDALDSNNVKNDNVIFTTNSTSVINRTIIIPKVNEDEIESVIKYEVQQYLPINLEDHMI
QYNVLEEKVIDGNEKLEVLIVVYPNKMVYSYAELINKIGRKPYALDLNYNSKRKAYYVMNPEIRESILSIDMGAENIALT
IMKDNELILIKTTKSGGNYLNSKISKVLEISLENAEMQKRENCNLMNREEGPLEHVVREVVDSWFDEASRIIKYYKSKNT
QNNIDKIYICGGSSNIKGLERYVSTKLNMKVKIVQGNSNIEFKKGVEEVNISEYINAIGALIRL

Sequences:

>Translated_384_residues
MAIENKEKKSILQMNVSDILKALKKKNSEKKNDKKGSKKKAKSVICKKTISIDIGSENTKIIVGRYHKNKVIIDKAFSFK
TPKDGIDDGHIKDIDSLARAITDALDSNNVKNDNVIFTTNSTSVINRTIIIPKVNEDEIESVIKYEVQQYLPINLEDHMI
QYNVLEEKVIDGNEKLEVLIVVYPNKMVYSYAELINKIGRKPYALDLNYNSKRKAYYVMNPEIRESILSIDMGAENIALT
IMKDNELILIKTTKSGGNYLNSKISKVLEISLENAEMQKRENCNLMNREEGPLEHVVREVVDSWFDEASRIIKYYKSKNT
QNNIDKIYICGGSSNIKGLERYVSTKLNMKVKIVQGNSNIEFKKGVEEVNISEYINAIGALIRL
>Mature_383_residues
AIENKEKKSILQMNVSDILKALKKKNSEKKNDKKGSKKKAKSVICKKTISIDIGSENTKIIVGRYHKNKVIIDKAFSFKT
PKDGIDDGHIKDIDSLARAITDALDSNNVKNDNVIFTTNSTSVINRTIIIPKVNEDEIESVIKYEVQQYLPINLEDHMIQ
YNVLEEKVIDGNEKLEVLIVVYPNKMVYSYAELINKIGRKPYALDLNYNSKRKAYYVMNPEIRESILSIDMGAENIALTI
MKDNELILIKTTKSGGNYLNSKISKVLEISLENAEMQKRENCNLMNREEGPLEHVVREVVDSWFDEASRIIKYYKSKNTQ
NNIDKIYICGGSSNIKGLERYVSTKLNMKVKIVQGNSNIEFKKGVEEVNISEYINAIGALIRL

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43739; Mature: 43608

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIENKEKKSILQMNVSDILKALKKKNSEKKNDKKGSKKKAKSVICKKTISIDIGSENTK
CCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCE
IIVGRYHKNKVIIDKAFSFKTPKDGIDDGHIKDIDSLARAITDALDSNNVKNDNVIFTTN
EEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC
STSVINRTIIIPKVNEDEIESVIKYEVQQYLPINLEDHMIQYNVLEEKVIDGNEKLEVLI
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHCCCCCCEEEEE
VVYPNKMVYSYAELINKIGRKPYALDLNYNSKRKAYYVMNPEIRESILSIDMGAENIALT
EECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEE
IMKDNELILIKTTKSGGNYLNSKISKVLEISLENAEMQKRENCNLMNREEGPLEHVVREV
EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHH
VDSWFDEASRIIKYYKSKNTQNNIDKIYICGGSSNIKGLERYVSTKLNMKVKIVQGNSNI
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC
EFKKGVEEVNISEYINAIGALIRL
CHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIENKEKKSILQMNVSDILKALKKKNSEKKNDKKGSKKKAKSVICKKTISIDIGSENTK
CCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCE
IIVGRYHKNKVIIDKAFSFKTPKDGIDDGHIKDIDSLARAITDALDSNNVKNDNVIFTTN
EEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC
STSVINRTIIIPKVNEDEIESVIKYEVQQYLPINLEDHMIQYNVLEEKVIDGNEKLEVLI
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHEEEEHHHHHHHCCCCCCEEEEE
VVYPNKMVYSYAELINKIGRKPYALDLNYNSKRKAYYVMNPEIRESILSIDMGAENIALT
EECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHCCCCCEEEEE
IMKDNELILIKTTKSGGNYLNSKISKVLEISLENAEMQKRENCNLMNREEGPLEHVVREV
EEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHH
VDSWFDEASRIIKYYKSKNTQNNIDKIYICGGSSNIKGLERYVSTKLNMKVKIVQGNSNI
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCC
EFKKGVEEVNISEYINAIGALIRL
CHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA