| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311207
Identifier: 18311207
GI number: 18311207
Start: 2547425
End: 2547796
Strand: Reverse
Name: 18311207
Synonym: CPE2225
Alternate gene names: NA
Gene position: 2547796-2547425 (Counterclockwise)
Preceding gene: 18311210
Following gene: 18311206
Centisome position: 84.05
GC content: 26.61
Gene sequence:
>372_bases ATGAAAAAGTGGGATTTGATTATAATTATAGTTTTAATAATTCTATCTTTAATGCCTATTAGACTTCTTATTTCAAGTAA TAATAGTGGAGATTTAAAAAGAGTAATTATAAGTGTTAATGGAGAAGAATATGAAAGTTTAGAGCTAAAGGAAAATCTTA ATAAGATTATTAAAATTGAAGAGGGATTAGGGGTTAATGAGATTTGTATAAATAAAGGACAGGTATATATGAATCATTCA AATTGTACAGATAAAGTGTGTATGAGACAAGGAAAGATAAGTAAGATAGGAGAAAGTATAGTATGCCTACCTAATAGGGT TTTTATTGAAATTAAAGGTGATGAAGAAGGAGAGTGCATATTATCTTACTAA
Upstream 100 bases:
>100_bases TTAATATTAAAAAAATTCCTTAAAGAGTAATAAAACAAATAATTTTAACTTTAAAATCATATATACATAACAAGGAACTG TTAATAGGGGAGAGTTTATT
Downstream 100 bases:
>100_bases GAAATTAAGTTTAAATCAAAAAGCTTAGGATTTAAATTTTATAATACTATAGAATTTTAGTAACAAAATTTAGTATTTAA TAAAATAGAATTCTAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKKWDLIIIIVLIILSLMPIRLLISSNNSGDLKRVIISVNGEEYESLELKENLNKIIKIEEGLGVNEICINKGQVYMNHS NCTDKVCMRQGKISKIGESIVCLPNRVFIEIKGDEEGECILSY
Sequences:
>Translated_123_residues MKKWDLIIIIVLIILSLMPIRLLISSNNSGDLKRVIISVNGEEYESLELKENLNKIIKIEEGLGVNEICINKGQVYMNHS NCTDKVCMRQGKISKIGESIVCLPNRVFIEIKGDEEGECILSY >Mature_123_residues MKKWDLIIIIVLIILSLMPIRLLISSNNSGDLKRVIISVNGEEYESLELKENLNKIIKIEEGLGVNEICINKGQVYMNHS NCTDKVCMRQGKISKIGESIVCLPNRVFIEIKGDEEGECILSY
Specific function: Unknown
COG id: COG5341
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13910; Mature: 13910
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWDLIIIIVLIILSLMPIRLLISSNNSGDLKRVIISVNGEEYESLELKENLNKIIKIE CCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCEEHHHHHHHHEEEEC EGLGVNEICINKGQVYMNHSNCTDKVCMRQGKISKIGESIVCLPNRVFIEIKGDEEGECI CCCCCCCEEECCCEEEEECCCCHHHHHHCCCCCHHCCCEEEECCCEEEEEEECCCCCCEE LSY ECC >Mature Secondary Structure MKKWDLIIIIVLIILSLMPIRLLISSNNSGDLKRVIISVNGEEYESLELKENLNKIIKIE CCCCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEECCCCCCEEHHHHHHHHEEEEC EGLGVNEICINKGQVYMNHSNCTDKVCMRQGKISKIGESIVCLPNRVFIEIKGDEEGECI CCCCCCCEEECCCEEEEECCCCHHHHHHCCCCCHHCCCEEEECCCEEEEEEECCCCCCEE LSY ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA