Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682726
Identifier: 182682726
GI number: 182682726
Start: 2515592
End: 2516959
Strand: Reverse
Name: 182682726
Synonym: XfasM23_2219
Alternate gene names: NA
Gene position: 2516959-2515592 (Counterclockwise)
Preceding gene: 182682727
Following gene: 182682725
Centisome position: 99.26
GC content: 51.46
Gene sequence:
>1368_bases ATGATCGTCAACTACGTCCAACAACAAGGCGCCACCGCCATTGGCCACTGGGTGGCCACCGGCCAACTGACCGAAGGCAG CCCCCTACACGCCGCCCTCCATGCCCTGCTGGCCTGCGCCGGTGCTGCGGCCAGCCAACAACGCTGCAGCAGTGGCGCCC AAGGCGCCGCCGCCTCCAGCGTCCTCACGGGATTATTTAGCGACCCCCGCCCCGAAGACACCGCCCAAGACCGCGAAGCC AAACGCAACCTCATTACCTCCATCGTCACCGGCATCGCCAGCACCACCCACACGGATGCGGCCACCGCCACCCATGCCGC CATCGCTGCCGTGGATAACAACTGGTTGGCGGCCAAACAATACGTTCAAATGGTAAGCGAGGAGCTTGAGGCCGCTACGG AGAAAGACAAAGGCCGCTTGGAAGAGGAGAAAGTAAGAGCGAAGTGGCGTGAGATCAGTGCCCGCCAAGATAAACTCACT GCTGATGGACTATTAAAAGGCTTAAAGGAGTCAGGCATCAGCAATATCAACGGTCTGGAGCACTTGATCCTGCATCCGGT GGATGTCTTTCATGAGTTGGAGAAAATCCTTACCCACCCAAAATTACTGGTGCAATTAGGTGAGCGCGCCGTTCAAGATC TGCTTAACAAGGTTTCTCGCATGGCGGAGGCTCTCTATGTTGGAGGCGATCAACATGCCAAGCAGTTTGGCGAAGATCTC GGCTCAGTGATCGCGGATGTAGGCTTTGCATTGGCTGCGGCCGGCACCGTCAAAGCGGGAGAGATCCTCGCCGAAGCAGG CATCAATCTCAGTAAAGATGTCTTGGAGGGGATGGCTACTTCCAAAGCCAATAAGCTGTCCAACGTTGATGACATTGTCA GCGCAGAACAAGAAGCACTGACGCGGATAGGTAATCACCCCAACGGCCCGGATTTAACCCAAAAACCGCCTGGTCAATTT ATCGCGCTGCAGCAGGAAAAGCGTATTGAGGATGTGAAAAGCGTGGTTGGCAGGCGTAGTCCGAAGAATGAATTAGTTGT TGATCGTATAAAGATTGAATACATACCGTATGACCCCTTAGTCAAAGGGGGCAGTAATAAAGCGGGTAATGTGAGGGTAT TTAAATCAGAAGCTTTAACTGATAAACAAATCATGAATTATGCACAGCAATTAGCGGGAGATGTGCCTTTAAAGGAGACG AGTAAAAAAGGAGTTTATTTGGCTGAACTGAGTGATGGAACCAAAGTGACATTGAGGTCTGTTTCTTCTTCAGATCAAGT AACTAAAGCCAGGTGGACGATTGATATAGCAAATAATCCTTCTTTGAGGGAGATTACAAAAGAAAAAGTTGAACTTAAAT TCAGATGA
Upstream 100 bases:
>100_bases CGCCTGGGGACCGGGCGGCACCTACCGCCAAATCACCACCGCCTTAGCCGCCGGTGCCAGCGGCAACGTCAGCGCTGCCA GCAGCGACCTTGCCAAACAC
Downstream 100 bases:
>100_bases TAGGTGATTAAATGTTAACGCAACAGCAGATAGATCATATTTATGATTCTTTAGGGTGTCCTTTGCATTTTCTTTGGAGC TATATAGGTACTGCGCATGG
Product: putative hemagglutinin-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MIVNYVQQQGATAIGHWVATGQLTEGSPLHAALHALLACAGAAASQQRCSSGAQGAAASSVLTGLFSDPRPEDTAQDREA KRNLITSIVTGIASTTHTDAATATHAAIAAVDNNWLAAKQYVQMVSEELEAATEKDKGRLEEEKVRAKWREISARQDKLT ADGLLKGLKESGISNINGLEHLILHPVDVFHELEKILTHPKLLVQLGERAVQDLLNKVSRMAEALYVGGDQHAKQFGEDL GSVIADVGFALAAAGTVKAGEILAEAGINLSKDVLEGMATSKANKLSNVDDIVSAEQEALTRIGNHPNGPDLTQKPPGQF IALQQEKRIEDVKSVVGRRSPKNELVVDRIKIEYIPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPLKET SKKGVYLAELSDGTKVTLRSVSSSDQVTKARWTIDIANNPSLREITKEKVELKFR
Sequences:
>Translated_455_residues MIVNYVQQQGATAIGHWVATGQLTEGSPLHAALHALLACAGAAASQQRCSSGAQGAAASSVLTGLFSDPRPEDTAQDREA KRNLITSIVTGIASTTHTDAATATHAAIAAVDNNWLAAKQYVQMVSEELEAATEKDKGRLEEEKVRAKWREISARQDKLT ADGLLKGLKESGISNINGLEHLILHPVDVFHELEKILTHPKLLVQLGERAVQDLLNKVSRMAEALYVGGDQHAKQFGEDL GSVIADVGFALAAAGTVKAGEILAEAGINLSKDVLEGMATSKANKLSNVDDIVSAEQEALTRIGNHPNGPDLTQKPPGQF IALQQEKRIEDVKSVVGRRSPKNELVVDRIKIEYIPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPLKET SKKGVYLAELSDGTKVTLRSVSSSDQVTKARWTIDIANNPSLREITKEKVELKFR >Mature_455_residues MIVNYVQQQGATAIGHWVATGQLTEGSPLHAALHALLACAGAAASQQRCSSGAQGAAASSVLTGLFSDPRPEDTAQDREA KRNLITSIVTGIASTTHTDAATATHAAIAAVDNNWLAAKQYVQMVSEELEAATEKDKGRLEEEKVRAKWREISARQDKLT ADGLLKGLKESGISNINGLEHLILHPVDVFHELEKILTHPKLLVQLGERAVQDLLNKVSRMAEALYVGGDQHAKQFGEDL GSVIADVGFALAAAGTVKAGEILAEAGINLSKDVLEGMATSKANKLSNVDDIVSAEQEALTRIGNHPNGPDLTQKPPGQF IALQQEKRIEDVKSVVGRRSPKNELVVDRIKIEYIPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPLKET SKKGVYLAELSDGTKVTLRSVSSSDQVTKARWTIDIANNPSLREITKEKVELKFR
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48967; Mature: 48967
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNYVQQQGATAIGHWVATGQLTEGSPLHAALHALLACAGAAASQQRCSSGAQGAAASS CCCHHHHHCCCHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH VLTGLFSDPRPEDTAQDREAKRNLITSIVTGIASTTHTDAATATHAAIAAVDNNWLAAKQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHH YVQMVSEELEAATEKDKGRLEEEKVRAKWREISARQDKLTADGLLKGLKESGISNINGLE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHH HLILHPVDVFHELEKILTHPKLLVQLGERAVQDLLNKVSRMAEALYVGGDQHAKQFGEDL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GSVIADVGFALAAAGTVKAGEILAEAGINLSKDVLEGMATSKANKLSNVDDIVSAEQEAL HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TRIGNHPNGPDLTQKPPGQFIALQQEKRIEDVKSVVGRRSPKNELVVDRIKIEYIPYDPL HHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC VKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPLKETSKKGVYLAELSDGTKVTLRS CCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEE VSSSDQVTKARWTIDIANNPSLREITKEKVELKFR CCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MIVNYVQQQGATAIGHWVATGQLTEGSPLHAALHALLACAGAAASQQRCSSGAQGAAASS CCCHHHHHCCCHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH VLTGLFSDPRPEDTAQDREAKRNLITSIVTGIASTTHTDAATATHAAIAAVDNNWLAAKQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCHHHHHH YVQMVSEELEAATEKDKGRLEEEKVRAKWREISARQDKLTADGLLKGLKESGISNINGLE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHH HLILHPVDVFHELEKILTHPKLLVQLGERAVQDLLNKVSRMAEALYVGGDQHAKQFGEDL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GSVIADVGFALAAAGTVKAGEILAEAGINLSKDVLEGMATSKANKLSNVDDIVSAEQEAL HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TRIGNHPNGPDLTQKPPGQFIALQQEKRIEDVKSVVGRRSPKNELVVDRIKIEYIPYDPL HHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC VKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPLKETSKKGVYLAELSDGTKVTLRS CCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEE VSSSDQVTKARWTIDIANNPSLREITKEKVELKFR CCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA