Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682687
Identifier: 182682687
GI number: 182682687
Start: 2472693
End: 2473397
Strand: Reverse
Name: 182682687
Synonym: XfasM23_2178
Alternate gene names: NA
Gene position: 2473397-2472693 (Counterclockwise)
Preceding gene: 182682688
Following gene: 182682686
Centisome position: 97.54
GC content: 59.86
Gene sequence:
>705_bases ATGCAGAACTACGTCAGTCTGCCGTTTGGTGAACACATGGGCTTTTTGATTGGTACGCTCGACGGTGATCCAAGCGTTGT CACCGCCCCGGCCTTGCCTCCACGGCCTACAACAGTGAATACCGAACTGATCAAAGCAGCCGTCGTATTTCTTCGTCGAA CTAGCCTGTCTATTGAGCCGGAGTCCTTCAAGAGGGATCTGGCCGCGCTCACCACGCTGGCCCTGATAGACGCGCAACAG CGCAAGTGCGTCGCGGCACTTGATGGAGACGTTTACGAGGATCTGCCTAAGGCGCGGATGGCGCTGGTCTTGCGCTTTGA GTCCTTGGTGTGTGCCCCCGGAGTGCAGTTTCAAGATACCGTGTCGCTGGAGCACGGCCTGCCGCAAACGCCGCCGGAGG GTTCGGACGACTGGATCAAGTGGTTCCTGGACGAAGACGAGCGCGATGGCTGGAGGCACCGTTTGGCCAATCTGGTTCCG CTGGAGGGGAACAAGAACGCGTCTGCCAGCAACGACGACTGTGCCAAGAAGAAGGACGCCTACTTCAGGGGCAAGGGCAA GGCGTCGCCCTTCCTGCTGCTGCAGCAAGTCAGATCAGAAAACGCGTGGACGCCCACGCTTCTGGCAGAGTGCCAGCAAC GCCTGGTGGGCGTCCTCAAAGACCATTGGAATCTCGCCGTCGCCACAGGCACGGCGGCAAGCTGA
Upstream 100 bases:
>100_bases TTTTCCAAGAACAACGGCCATGCAGCCAAGAAGCAGGCGGTGCTGGACAAGTTTGCTACCTTCTTTGAGCGATATTTTGG GCTGGTTTGAATAGCGGGTA
Downstream 100 bases:
>100_bases GAAACGTATCAATGCAGAAGACTCAACAAGACCAAAGCCAGATCAAGTGGATTTCCGACTTCATCTGGAACATCGCTGAC AACCGCCTGCGCGATGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQNYVSLPFGEHMGFLIGTLDGDPSVVTAPALPPRPTTVNTELIKAAVVFLRRTSLSIEPESFKRDLAALTTLALIDAQQ RKCVAALDGDVYEDLPKARMALVLRFESLVCAPGVQFQDTVSLEHGLPQTPPEGSDDWIKWFLDEDERDGWRHRLANLVP LEGNKNASASNDDCAKKKDAYFRGKGKASPFLLLQQVRSENAWTPTLLAECQQRLVGVLKDHWNLAVATGTAAS
Sequences:
>Translated_234_residues MQNYVSLPFGEHMGFLIGTLDGDPSVVTAPALPPRPTTVNTELIKAAVVFLRRTSLSIEPESFKRDLAALTTLALIDAQQ RKCVAALDGDVYEDLPKARMALVLRFESLVCAPGVQFQDTVSLEHGLPQTPPEGSDDWIKWFLDEDERDGWRHRLANLVP LEGNKNASASNDDCAKKKDAYFRGKGKASPFLLLQQVRSENAWTPTLLAECQQRLVGVLKDHWNLAVATGTAAS >Mature_234_residues MQNYVSLPFGEHMGFLIGTLDGDPSVVTAPALPPRPTTVNTELIKAAVVFLRRTSLSIEPESFKRDLAALTTLALIDAQQ RKCVAALDGDVYEDLPKARMALVLRFESLVCAPGVQFQDTVSLEHGLPQTPPEGSDDWIKWFLDEDERDGWRHRLANLVP LEGNKNASASNDDCAKKKDAYFRGKGKASPFLLLQQVRSENAWTPTLLAECQQRLVGVLKDHWNLAVATGTAAS
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25742; Mature: 25742
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYVSLPFGEHMGFLIGTLDGDPSVVTAPALPPRPTTVNTELIKAAVVFLRRTSLSIEP CCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH ESFKRDLAALTTLALIDAQQRKCVAALDGDVYEDLPKARMALVLRFESLVCAPGVQFQDT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC VSLEHGLPQTPPEGSDDWIKWFLDEDERDGWRHRLANLVPLEGNKNASASNDDCAKKKDA EEHHCCCCCCCCCCCHHHEEEECCCCCCCHHHHHHHCEECCCCCCCCCCCCCHHHHHHCC YFRGKGKASPFLLLQQVRSENAWTPTLLAECQQRLVGVLKDHWNLAVATGTAAS EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC >Mature Secondary Structure MQNYVSLPFGEHMGFLIGTLDGDPSVVTAPALPPRPTTVNTELIKAAVVFLRRTSLSIEP CCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH ESFKRDLAALTTLALIDAQQRKCVAALDGDVYEDLPKARMALVLRFESLVCAPGVQFQDT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC VSLEHGLPQTPPEGSDDWIKWFLDEDERDGWRHRLANLVPLEGNKNASASNDDCAKKKDA EEHHCCCCCCCCCCCHHHEEEECCCCCCCHHHHHHHCEECCCCCCCCCCCCCHHHHHHCC YFRGKGKASPFLLLQQVRSENAWTPTLLAECQQRLVGVLKDHWNLAVATGTAAS EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA