Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682663
Identifier: 182682663
GI number: 182682663
Start: 2432536
End: 2433384
Strand: Reverse
Name: 182682663
Synonym: XfasM23_2153
Alternate gene names: NA
Gene position: 2433384-2432536 (Counterclockwise)
Preceding gene: 182682664
Following gene: 182682662
Centisome position: 95.97
GC content: 49.35
Gene sequence:
>849_bases ATGCTAGTTTCTGAACTCAAGAATAGGCATCTGATCAGTAATACGCCAAGGGTGATGGTCGTAGACGGTTCCAAATTGGT TCGTAAATTGATTACAGACGTGTTGCGGCGTGAGTTGCCAGAAGTAGATGTAATTGGCTGTGTCGGCATTGCTGAAGCAC GGCAGACCCTAGAGGCTGGAACAGTCGATTTGGTGACTACTTCGCTTTTTCTGCCTGATGGTGATGGATTGGCTTTAGCC CGTAGCGTACGTGAGGAAGCGGGCCAAGCTTATGTGCCAGTGATCGTTGTCTCTGGAGATACTCAGCAGCACTTGGTCGA GCGTCGTTTCACTGAGTATGTGACCGATTATTTCGACAAAGCGTTAGGTCACGAGGCACTGGCTGCCTTCATACGTGGTT ATGTGCAGCCCGAGCCAGTATCCAGTGGCACTGTGTTGTATGTAGAAGATAGTTGTGTGGTTGCTGAGGCGACAACACGT ATGCTGGAGCGTCAAGGTTTACGTGTGGTTCACGTGCTTACCGCTGAAGATGCCTTCGCATTGTTAACTGCTGAATCGTT GGGGCGCACCGAGTACCGCATCAATTTGGTTCTGACTGATGTGACCCTGAAAGGTGAGCTTAGTGGCTGTGATGTAGTGC AGCGCATCCGTATCGATTTTTCTTATGGTAAACGCCGCCTTCCAGTGCTTGTTATGACTGGCGACACCAATTCTCAAAAT CAATCCGAATTGTTGCGAGCCGGAGCTAATGATTTGGTGCAGAAGCCGATTGAGGAGCGTTTGCTTGTAACCAAGGTGTT GTTCCAACTGCGCTTGGCGCGTCTTAAAGATGATCTAGCGACTATTTGA
Upstream 100 bases:
>100_bases ATGATTCTTGGAGGTATTCTCCTGTTGGGTTGGCTTGGTGTATGGCTGGTGACGGGGCATTTTTTACGTCAAATGCGCCC CGCGTAAATATGAGAGCTAA
Downstream 100 bases:
>100_bases ATAGCATGAACGAGCAAGGTAAGGCCATTAATAGTAGTGCCGAGTCTCGAATTCAGTTGGAATCTTCTTGGAAGGCGCAC GTTGGTAACTGGTTATTGCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: GAF Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Response Regulator Receiver Protein; Response Regulator Receiver Domain Protein; Two-Component System Regulatory Protein; Metal-Dependent Phosphohydrolase HD Subdomain; Response Regulator Receiver Modulated Diguanylate Cyclase; Signal Transduction Response Regulator; Sensor Protein; Two-Component Response Regulator Transcriptional Regulator; Response Regulator Protein
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLVSELKNRHLISNTPRVMVVDGSKLVRKLITDVLRRELPEVDVIGCVGIAEARQTLEAGTVDLVTTSLFLPDGDGLALA RSVREEAGQAYVPVIVVSGDTQQHLVERRFTEYVTDYFDKALGHEALAAFIRGYVQPEPVSSGTVLYVEDSCVVAEATTR MLERQGLRVVHVLTAEDAFALLTAESLGRTEYRINLVLTDVTLKGELSGCDVVQRIRIDFSYGKRRLPVLVMTGDTNSQN QSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLKDDLATI
Sequences:
>Translated_282_residues MLVSELKNRHLISNTPRVMVVDGSKLVRKLITDVLRRELPEVDVIGCVGIAEARQTLEAGTVDLVTTSLFLPDGDGLALA RSVREEAGQAYVPVIVVSGDTQQHLVERRFTEYVTDYFDKALGHEALAAFIRGYVQPEPVSSGTVLYVEDSCVVAEATTR MLERQGLRVVHVLTAEDAFALLTAESLGRTEYRINLVLTDVTLKGELSGCDVVQRIRIDFSYGKRRLPVLVMTGDTNSQN QSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLKDDLATI >Mature_282_residues MLVSELKNRHLISNTPRVMVVDGSKLVRKLITDVLRRELPEVDVIGCVGIAEARQTLEAGTVDLVTTSLFLPDGDGLALA RSVREEAGQAYVPVIVVSGDTQQHLVERRFTEYVTDYFDKALGHEALAAFIRGYVQPEPVSSGTVLYVEDSCVVAEATTR MLERQGLRVVHVLTAEDAFALLTAESLGRTEYRINLVLTDVTLKGELSGCDVVQRIRIDFSYGKRRLPVLVMTGDTNSQN QSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLKDDLATI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31218; Mature: 31218
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSELKNRHLISNTPRVMVVDGSKLVRKLITDVLRRELPEVDVIGCVGIAEARQTLEAG CCHHHHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC TVDLVTTSLFLPDGDGLALARSVREEAGQAYVPVIVVSGDTQQHLVERRFTEYVTDYFDK CEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH ALGHEALAAFIRGYVQPEPVSSGTVLYVEDSCVVAEATTRMLERQGLRVVHVLTAEDAFA HHCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHCCCEEEEEEECCCHHH LLTAESLGRTEYRINLVLTDVTLKGELSGCDVVQRIRIDFSYGKRRLPVLVMTGDTNSQN EEEHHHCCCEEEEEEEEEEEEEEECCCCCHHHHHHHEEECCCCCCCCCEEEEECCCCCCC QSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLKDDLATI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVSELKNRHLISNTPRVMVVDGSKLVRKLITDVLRRELPEVDVIGCVGIAEARQTLEAG CCHHHHCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC TVDLVTTSLFLPDGDGLALARSVREEAGQAYVPVIVVSGDTQQHLVERRFTEYVTDYFDK CEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH ALGHEALAAFIRGYVQPEPVSSGTVLYVEDSCVVAEATTRMLERQGLRVVHVLTAEDAFA HHCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEHHHHHHHHHHCCCEEEEEEECCCHHH LLTAESLGRTEYRINLVLTDVTLKGELSGCDVVQRIRIDFSYGKRRLPVLVMTGDTNSQN EEEHHHCCCEEEEEEEEEEEEEEECCCCCHHHHHHHEEECCCCCCCCCEEEEECCCCCCC QSELLRAGANDLVQKPIEERLLVTKVLFQLRLARLKDDLATI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA