| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is phhB
Identifier: 182682597
GI number: 182682597
Start: 2344024
End: 2344374
Strand: Direct
Name: phhB
Synonym: XfasM23_2085
Alternate gene names: NA
Gene position: 2344024-2344374 (Clockwise)
Preceding gene: 182682594
Following gene: 182682598
Centisome position: 92.44
GC content: 49.29
Gene sequence:
>351_bases ATGAACGATCGGATTACTCTAGCTCAAGCTCACTGCCAGCCGCGAGAAAAAAAAGAACACAAACTCGGCCAAGCCCGCTT AGCCGAACTGTTGACACAAGTCCCAGGATGGGAATTGAGTAATAACGGACATGCACTCACCCGGACATTCCAATTCGACA ATTATTACCGTACCCTCGCATTCGTTAACGCGCTCGCTTTTATCGCACACTGCGAAGATCATCACCCGGACATGAACGTG CACTATGGCAGGGCTGTCGTGTGCTTTTCAACGCATAAAATAGGGGGAATCAGCGAGATTGACTTCATTTGCGCCGCTAA GACTTCCGCCCTATACGAACAAGGAATCTGA
Upstream 100 bases:
>100_bases GCTGTGTCAGAAATCTGGATCATGTTGGTTATTCTAAATTCACTTAGTATCGCATTCGCCTCACCCTAGTATGCACATAC TAATGACACCAGGATGCTCA
Downstream 100 bases:
>100_bases CATCGCCATGAAATTGCTGCATTTTGCTGACCTGGTGGCACTATTGCTGGCACTTGATGCCTGTAACAAGCGTGTCGATC AAACGCCCGTAACCCCTCCT
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI
Sequences:
>Translated_116_residues MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI >Mature_116_residues MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_XYLF2 (B2I9W6)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830757.1 - ProteinModelPortal: B2I9W6 - SMR: B2I9W6 - GeneID: 6203460 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_2085 - HOGENOM: HBG705804 - OMA: AKTAQLY - ProtClustDB: PRK00823 - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 13113; Mature: 13113
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHHHH FVNALAFIAHCEDHHPDMNVHYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI HHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLA CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHHHH FVNALAFIAHCEDHHPDMNVHYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI HHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA