Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is phhB

Identifier: 182682597

GI number: 182682597

Start: 2344024

End: 2344374

Strand: Direct

Name: phhB

Synonym: XfasM23_2085

Alternate gene names: NA

Gene position: 2344024-2344374 (Clockwise)

Preceding gene: 182682594

Following gene: 182682598

Centisome position: 92.44

GC content: 49.29

Gene sequence:

>351_bases
ATGAACGATCGGATTACTCTAGCTCAAGCTCACTGCCAGCCGCGAGAAAAAAAAGAACACAAACTCGGCCAAGCCCGCTT
AGCCGAACTGTTGACACAAGTCCCAGGATGGGAATTGAGTAATAACGGACATGCACTCACCCGGACATTCCAATTCGACA
ATTATTACCGTACCCTCGCATTCGTTAACGCGCTCGCTTTTATCGCACACTGCGAAGATCATCACCCGGACATGAACGTG
CACTATGGCAGGGCTGTCGTGTGCTTTTCAACGCATAAAATAGGGGGAATCAGCGAGATTGACTTCATTTGCGCCGCTAA
GACTTCCGCCCTATACGAACAAGGAATCTGA

Upstream 100 bases:

>100_bases
GCTGTGTCAGAAATCTGGATCATGTTGGTTATTCTAAATTCACTTAGTATCGCATTCGCCTCACCCTAGTATGCACATAC
TAATGACACCAGGATGCTCA

Downstream 100 bases:

>100_bases
CATCGCCATGAAATTGCTGCATTTTGCTGACCTGGTGGCACTATTGCTGGCACTTGATGCCTGTAACAAGCGTGTCGATC
AAACGCCCGTAACCCCTCCT

Product: pterin-4-alpha-carbinolamine dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV
HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI

Sequences:

>Translated_116_residues
MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV
HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI
>Mature_116_residues
MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLAFVNALAFIAHCEDHHPDMNV
HYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHS_XYLF2 (B2I9W6)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001830757.1
- ProteinModelPortal:   B2I9W6
- SMR:   B2I9W6
- GeneID:   6203460
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_2085
- HOGENOM:   HBG705804
- OMA:   AKTAQLY
- ProtClustDB:   PRK00823
- HAMAP:   MF_00434
- InterPro:   IPR001533
- Gene3D:   G3DSA:3.30.1360.20
- PANTHER:   PTHR12599

Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh

EC number: =4.2.1.96

Molecular weight: Translated: 13113; Mature: 13113

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLA
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHHHH
FVNALAFIAHCEDHHPDMNVHYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI
HHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDRITLAQAHCQPREKKEHKLGQARLAELLTQVPGWELSNNGHALTRTFQFDNYYRTLA
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHHHHH
FVNALAFIAHCEDHHPDMNVHYGRAVVCFSTHKIGGISEIDFICAAKTSALYEQGI
HHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA