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The map label for this gene is yoaJ [H]

Identifier: 182682471

GI number: 182682471

Start: 2194796

End: 2196550

Strand: Reverse

Name: yoaJ [H]

Synonym: XfasM23_1958

Alternate gene names: 182682471

Gene position: 2196550-2194796 (Counterclockwise)

Preceding gene: 182682472

Following gene: 182682469

Centisome position: 86.63

GC content: 52.82

Gene sequence:

>1755_bases
ATGCGACGCTTGGCAATCTTATTTTGGCTTGCAACATCCGGTTGCGTGGCCTCCGCCATGTACGGTGGAACGGTGGGTGC
ACAAAATGCAGTGTCTGATACTCACTTTGTTGAACCACTCCGCGGCGTTAACTGGCGTGGTTTGGAAACGGCGCAGCACC
TGCCGCAAGGTTTAAATCAACGTCCCTGGCGTGAAGTACTCGACCAAATGCAGAGCCTAGGCATTAACGCAATACGCCTG
CCCCTGTGCTCGGACACCCTACATGGCGCCATGCCTACCAATCTGGATCTAGTGCGTAATCCAGATCTCAAAGGACGTAC
CGCATTGCAGATTGCCGACGCAATCATGGATGAAGCTGGGAAACGTGGGATGCGGGTCCTCCTGGCGTATCACGGCGTGG
AGTGTCCTACCGACAGAAACCCATTATTGCGCAGCGTAGATGAATCAGAGCACCAATGGATCAGCGATGTGCAATTCATC
ACCTCGCATTATCGTGCTCAACAAAAAGTAGTGATGGGCGTGGACTTGGCCGACATGGCAAACCATCGCCCCTTTCAGAG
CGGTGGTGATAGCGCGCCTGATTGGAATCCTGTCGTCGAGCGTGCCGCCGCTGCCATTCTGGCGATGAATCCCGACTGGT
TGATTGGTGTGCAGCTTGTTGGCCTGAATCCCCCCTGCTTGGATGCCTCCGCTCCCATCTCCGATGACAACATAAAATCG
CAGCACTGTGTCCAATTACGCATTCCTGCTCGGAGCCTCTTGCTCATGCCGCGCTTCGCGGGCACTGACATGGATACTGA
AGCTGCCCTTGGCGCATTTTCTGGAAAACAAACCGTGTTACCCAACTCTCTGGATGCCACGGATGCCGAGCAGCTCGCCC
ATCGGATTGATGCACTGCTGGCATTTGGTATACGCCAAGGCTTTTATGGATCTTGGATGACCTCAGCACAGATGCCATTT
GGCCTGCTCGATAACGACGGCCGTACCCCACGTACCTCATTGATTGCACAACTACATCGTTGGTGGGGTGTTAGCCGTGT
CGATGTTGCCAGTGAGAATGCTACGACGAAGAATCAAACAACGACCGATACCAATGGATGTGTTGCTGGTGATAACAGCG
TGCCACTCAATGGTTGGGACACCTCTTTCAGTGGTGTCGCCACCTATACCTATACGGGTTACAAAGGCGGCGCATTGATG
CTGGATCCGATTCAGTCCCATGTGCAAATCACTGCACTGAATCCTACTCAACTCAATTTGGGGGGGATTCCCGCTGCGAT
GGCCGGTGCTTATTTGCGTGTGCAGGGTCCGAAGGGAAGCACAACCGTCTACGTGACGGACCTCTATCCCACCGGATCTT
CCGGGGGATTAGATCTTTCGCCGAATGCCTTTGCCAGTATCGGCAATATGGCTCAAGGGCGTATCCCCGTGCAATGGAAG
GTCGTCTCAGCACCTGTGAGTGGCAACTTGATCTATCGGGTAAAAAAGGGAAGCTCGGGATGGTGGGCAGCGATCCAAGT
ACGTGAACATCGGTATCCAGTCCTCAAACTTGAAATCTGTCAGGATGGCACCTGGTTGAATTTGCCAAAGAGAAATTACA
ACTACTTTGTTGGTACCCGACTGGGTAACCAACCCTTGTCAATGCGCATGACAGATATTCGTGGTCAGACCTTGATTGAT
ACGCTTCCCGCCTTGCCCAATAAGGCTTCCTCAAAAGCATATTCTGTGAATGGAAATGTCCAGTTTTCCGAATAA

Upstream 100 bases:

>100_bases
GCCTAGGTACGGATATGATCACCGTGGTTGATCGCAATTCCCCTATAGCTCTGCGCTATGGGGACAGTTGTGTGTTAGTC
CAACACAAATGAGGTATTAG

Downstream 100 bases:

>100_bases
GACCGTGACTGGCTCAGCCTGGTTCTCCTACCTGAGTGGTGATTGCCTGAACAGATTAATGAGGTTTTTAAAACTGCTTT
AAGCGCACTGACCTTGGAGC

Product: rare lipoprotein A

Products: NA

Alternate protein names: EXLX1 [H]

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MRRLAILFWLATSGCVASAMYGGTVGAQNAVSDTHFVEPLRGVNWRGLETAQHLPQGLNQRPWREVLDQMQSLGINAIRL
PLCSDTLHGAMPTNLDLVRNPDLKGRTALQIADAIMDEAGKRGMRVLLAYHGVECPTDRNPLLRSVDESEHQWISDVQFI
TSHYRAQQKVVMGVDLADMANHRPFQSGGDSAPDWNPVVERAAAAILAMNPDWLIGVQLVGLNPPCLDASAPISDDNIKS
QHCVQLRIPARSLLLMPRFAGTDMDTEAALGAFSGKQTVLPNSLDATDAEQLAHRIDALLAFGIRQGFYGSWMTSAQMPF
GLLDNDGRTPRTSLIAQLHRWWGVSRVDVASENATTKNQTTTDTNGCVAGDNSVPLNGWDTSFSGVATYTYTGYKGGALM
LDPIQSHVQITALNPTQLNLGGIPAAMAGAYLRVQGPKGSTTVYVTDLYPTGSSGGLDLSPNAFASIGNMAQGRIPVQWK
VVSAPVSGNLIYRVKKGSSGWWAAIQVREHRYPVLKLEICQDGTWLNLPKRNYNYFVGTRLGNQPLSMRMTDIRGQTLID
TLPALPNKASSKAYSVNGNVQFSE

Sequences:

>Translated_584_residues
MRRLAILFWLATSGCVASAMYGGTVGAQNAVSDTHFVEPLRGVNWRGLETAQHLPQGLNQRPWREVLDQMQSLGINAIRL
PLCSDTLHGAMPTNLDLVRNPDLKGRTALQIADAIMDEAGKRGMRVLLAYHGVECPTDRNPLLRSVDESEHQWISDVQFI
TSHYRAQQKVVMGVDLADMANHRPFQSGGDSAPDWNPVVERAAAAILAMNPDWLIGVQLVGLNPPCLDASAPISDDNIKS
QHCVQLRIPARSLLLMPRFAGTDMDTEAALGAFSGKQTVLPNSLDATDAEQLAHRIDALLAFGIRQGFYGSWMTSAQMPF
GLLDNDGRTPRTSLIAQLHRWWGVSRVDVASENATTKNQTTTDTNGCVAGDNSVPLNGWDTSFSGVATYTYTGYKGGALM
LDPIQSHVQITALNPTQLNLGGIPAAMAGAYLRVQGPKGSTTVYVTDLYPTGSSGGLDLSPNAFASIGNMAQGRIPVQWK
VVSAPVSGNLIYRVKKGSSGWWAAIQVREHRYPVLKLEICQDGTWLNLPKRNYNYFVGTRLGNQPLSMRMTDIRGQTLID
TLPALPNKASSKAYSVNGNVQFSE
>Mature_584_residues
MRRLAILFWLATSGCVASAMYGGTVGAQNAVSDTHFVEPLRGVNWRGLETAQHLPQGLNQRPWREVLDQMQSLGINAIRL
PLCSDTLHGAMPTNLDLVRNPDLKGRTALQIADAIMDEAGKRGMRVLLAYHGVECPTDRNPLLRSVDESEHQWISDVQFI
TSHYRAQQKVVMGVDLADMANHRPFQSGGDSAPDWNPVVERAAAAILAMNPDWLIGVQLVGLNPPCLDASAPISDDNIKS
QHCVQLRIPARSLLLMPRFAGTDMDTEAALGAFSGKQTVLPNSLDATDAEQLAHRIDALLAFGIRQGFYGSWMTSAQMPF
GLLDNDGRTPRTSLIAQLHRWWGVSRVDVASENATTKNQTTTDTNGCVAGDNSVPLNGWDTSFSGVATYTYTGYKGGALM
LDPIQSHVQITALNPTQLNLGGIPAAMAGAYLRVQGPKGSTTVYVTDLYPTGSSGGLDLSPNAFASIGNMAQGRIPVQWK
VVSAPVSGNLIYRVKKGSSGWWAAIQVREHRYPVLKLEICQDGTWLNLPKRNYNYFVGTRLGNQPLSMRMTDIRGQTLID
TLPALPNKASSKAYSVNGNVQFSE

Specific function: May promote colonization of plant roots. May cause loosening and extension of plant cell walls by disrupting non- covalent bonding between cellulose microfibrils and matrix glucans. Has very low expansin activity (in vitro). No enzymatic activity has been

COG id: COG2730

COG function: function code G; Endoglucanase

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 expansin-like EG45 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR007117 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 63479; Mature: 63479

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAILFWLATSGCVASAMYGGTVGAQNAVSDTHFVEPLRGVNWRGLETAQHLPQGLNQ
CCCEEEEEEEHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC
RPWREVLDQMQSLGINAIRLPLCSDTLHGAMPTNLDLVRNPDLKGRTALQIADAIMDEAG
CHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC
KRGMRVLLAYHGVECPTDRNPLLRSVDESEHQWISDVQFITSHYRAQQKVVMGVDLADMA
CCCEEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHH
NHRPFQSGGDSAPDWNPVVERAAAAILAMNPDWLIGVQLVGLNPPCLDASAPISDDNIKS
CCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
QHCVQLRIPARSLLLMPRFAGTDMDTEAALGAFSGKQTVLPNSLDATDAEQLAHRIDALL
CEEEEEEECHHHEEEEECCCCCCCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHH
AFGIRQGFYGSWMTSAQMPFGLLDNDGRTPRTSLIAQLHRWWGVSRVDVASENATTKNQT
HHHHHCCCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
TTDTNGCVAGDNSVPLNGWDTSFSGVATYTYTGYKGGALMLDPIQSHVQITALNPTQLNL
CCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCEEEC
GGIPAAMAGAYLRVQGPKGSTTVYVTDLYPTGSSGGLDLSPNAFASIGNMAQGRIPVQWK
CCCCHHHCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
VVSAPVSGNLIYRVKKGSSGWWAAIQVREHRYPVLKLEICQDGTWLNLPKRNYNYFVGTR
EEECCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEEEEEE
LGNQPLSMRMTDIRGQTLIDTLPALPNKASSKAYSVNGNVQFSE
CCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCEEECC
>Mature Secondary Structure
MRRLAILFWLATSGCVASAMYGGTVGAQNAVSDTHFVEPLRGVNWRGLETAQHLPQGLNQ
CCCEEEEEEEHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCC
RPWREVLDQMQSLGINAIRLPLCSDTLHGAMPTNLDLVRNPDLKGRTALQIADAIMDEAG
CHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC
KRGMRVLLAYHGVECPTDRNPLLRSVDESEHQWISDVQFITSHYRAQQKVVMGVDLADMA
CCCEEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHH
NHRPFQSGGDSAPDWNPVVERAAAAILAMNPDWLIGVQLVGLNPPCLDASAPISDDNIKS
CCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC
QHCVQLRIPARSLLLMPRFAGTDMDTEAALGAFSGKQTVLPNSLDATDAEQLAHRIDALL
CEEEEEEECHHHEEEEECCCCCCCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHH
AFGIRQGFYGSWMTSAQMPFGLLDNDGRTPRTSLIAQLHRWWGVSRVDVASENATTKNQT
HHHHHCCCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
TTDTNGCVAGDNSVPLNGWDTSFSGVATYTYTGYKGGALMLDPIQSHVQITALNPTQLNL
CCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCEEEC
GGIPAAMAGAYLRVQGPKGSTTVYVTDLYPTGSSGGLDLSPNAFASIGNMAQGRIPVQWK
CCCCHHHCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
VVSAPVSGNLIYRVKKGSSGWWAAIQVREHRYPVLKLEICQDGTWLNLPKRNYNYFVGTR
EEECCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEEEEEE
LGNQPLSMRMTDIRGQTLIDTLPALPNKASSKAYSVNGNVQFSE
CCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]