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The map label for this gene is yoaA [H]

Identifier: 182682415

GI number: 182682415

Start: 2115613

End: 2117640

Strand: Direct

Name: yoaA [H]

Synonym: XfasM23_1901

Alternate gene names: 182682415

Gene position: 2115613-2117640 (Clockwise)

Preceding gene: 182682414

Following gene: 182682420

Centisome position: 83.43

GC content: 58.63

Gene sequence:

>2028_bases
ATGTCCATGCTTTCCCGGGCTAGCATCGAAGCACTCAGTGATGGCGGCCTCCTGGCGCGCCAACTCGATAATTTTGTTCC
GCGTCCGGGGCAACAACGGCTGACTGCCGCGATTGGCGAGGTTTTTGAGCAACGCAACATTCTGCTGGCTGAAGCCGGGA
CCGGCACCGGCAAGACCTTTGCTTACCTGGTACCGACGTTGCTGTCAGGACTGAAAACCATCATTTCCACAGGCACCCGC
GCGTTACAGGAGCAGCTCTACCACCGTGATCTACCACGGGTACGCGCTGCCCTTGGCGTCGACCTGCGCAGCGCATTGCT
GAAAGGCCGCACCAACTATGTGTGTAAATACCGTCTAGAGCAGACCTGTGCTGCGCCCCATCTAGGCACCGCGGAGCAAA
CGACGCAACTGCAGCGCATCCTCACCTGGAGCGGCCGCACCCAATTCGGCGATATGGCCGAACTGGACACGTTGCCAGAC
GACTCACCGCTCCTACCGCTGGTCACCTCGACACTGGATAACTGCCTGGGAAAGGATTGCCCATTCTGGAATGAATGCTT
TGTCGTGCAAGCACGGCAGCGTGCCCAAGCGGCGGATGTTGTCGTCGTCAACCATCATCTGCTGCTGGCTGATTTAGCAC
TCAAACAAGAGGGCTTCGGCGAGATATTGCCAGGCGCACAGGCATTTATCATTGACGAAGCACACCAGCTCCCGGCACTG
GCCGCTAACTTTTTTGGCGAGAGTTTCGGCATGCGTCCGTTACAAGAACTGGGACGCGACTGCATGATCGAAGCACGCTC
GGTCGCTGGTGCGCAGGCCGCACTGCAACACTCCGTATGGCAATTGGAGCAGGCCTTACGCACGCTGCGCGCGGCAATGG
AAGGCTTACCATCACGCGGCACGCAATCGCGCCTGCTCGCTAAACCAGAGGTATGTGAGGGATTTGAAACTCTCATCACT
GCGCTGACCTCGCTACACTCCCTGCTGGTTCCACTGCGCAGCGCCGCAGCAGGCTTGGATGCCTGCGCCGCACGTGCCCA
GGAGGCACTGTCCCGGCTATTACGTTGGCTGGGGGAAACGGCCGAAACAAGCGGGTTAGAGGGGGATACCCCCTCTAACA
ACGACGTCCTCTGGTACGAACTGACACAACGCGGCTTTCGCTGTCAGCGCACGCCACTGGATGTCTCTGCGCAATTACAA
GCACACCGTGAAACATCAATGGCCGCATGGGTGTTCACCTCAGCAACATTGGCGGTGGATGGTAGATTCGAACATATCGC
ACGACGCCTGGGCCTGAATCATCCCATGACACTGCTGCAACCCAGTACCTTCGATTGGGCGCGGCAAGCATTATGCTACC
TGCCTCCAGGCTTACCGAATCCAGCGGCGCACGGCTTCGGAGCCACCTTGATTGAGGCATTAATTCCGGTGCTGGAAGCC
TCTTCAGGACGCGCTTTTTTGCTGTTCGCCTCACATCGTGCATTACGCGAAGCCGCCACAGCGCTACGCGGCGGGCCTTG
GCCATTGTTCGTGCAGGGAGACGCGCCGCGCGCCACGCTCCTAGACCGCTTCCGAGTCTCTGGCAATGGCCTATTGCTCG
GCTCAGCGAGCTTCCGCGAAGGTGTAGATGTGGCAGGGGAAGCGTTGAGCGTGGTCGTCATTGACAAGTTACCGTTTACA
GCACCGGACGATCCGGTATTCGAAGCGCGTTTGGAAGCCATCCGCCAGGAAGGCGGCAACCCGTTTTTTGACGAACAATT
GCCCCAAGCGGTCATCGCACTGAAGCAAGGCGTTGGCCGACTCATTCGCAGCGAGTCTGATCGCGGCGTGCTGGTGCTGT
GTGACCCGAGACTGCTGTCCAAAAGCTACGGACGGATATTTCTAGATTCGCTGCCCTCATTCCCGCAGACACGCGATATT
GCTGAGGTACGTGCGTTTTTCAACGGCAGCAATACTGCTCCCACGGAATCACGGCACGATTCCCCAATTTCACACCGCCA
AGCGTCCGGTGTAGACCGGATCGGATGA

Upstream 100 bases:

>100_bases
ACATGCCTGGTCCACCATTGCATTGCAGCGCGCTGCTGCGCCCCCTGTCCTACGACACGATGCACCTCACGCGTGTTTTT
CCAGAGCCTTGACCGTAGCC

Downstream 100 bases:

>100_bases
TTTCCCACGTTTTTTCGCCTCAGCACACCAAACAATCACCCATTGCTAGATGCGCTCGTGCAAAGCATCAAAGCATCAAG
GCGTTGCAGAGGCCTGCGCT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 674

Protein sequence:

>675_residues
MSMLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEAGTGTGKTFAYLVPTLLSGLKTIISTGTR
ALQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKYRLEQTCAAPHLGTAEQTTQLQRILTWSGRTQFGDMAELDTLPD
DSPLLPLVTSTLDNCLGKDCPFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPAL
AANFFGESFGMRPLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRGTQSRLLAKPEVCEGFETLIT
ALTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGETAETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQ
AHRETSMAAWVFTSATLAVDGRFEHIARRLGLNHPMTLLQPSTFDWARQALCYLPPGLPNPAAHGFGATLIEALIPVLEA
SSGRAFLLFASHRALREAATALRGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFREGVDVAGEALSVVVIDKLPFT
APDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGRLIRSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDI
AEVRAFFNGSNTAPTESRHDSPISHRQASGVDRIG

Sequences:

>Translated_675_residues
MSMLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEAGTGTGKTFAYLVPTLLSGLKTIISTGTR
ALQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKYRLEQTCAAPHLGTAEQTTQLQRILTWSGRTQFGDMAELDTLPD
DSPLLPLVTSTLDNCLGKDCPFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPAL
AANFFGESFGMRPLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRGTQSRLLAKPEVCEGFETLIT
ALTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGETAETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQ
AHRETSMAAWVFTSATLAVDGRFEHIARRLGLNHPMTLLQPSTFDWARQALCYLPPGLPNPAAHGFGATLIEALIPVLEA
SSGRAFLLFASHRALREAATALRGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFREGVDVAGEALSVVVIDKLPFT
APDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGRLIRSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDI
AEVRAFFNGSNTAPTESRHDSPISHRQASGVDRIG
>Mature_674_residues
SMLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEAGTGTGKTFAYLVPTLLSGLKTIISTGTRA
LQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKYRLEQTCAAPHLGTAEQTTQLQRILTWSGRTQFGDMAELDTLPDD
SPLLPLVTSTLDNCLGKDCPFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPALA
ANFFGESFGMRPLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRGTQSRLLAKPEVCEGFETLITA
LTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGETAETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQA
HRETSMAAWVFTSATLAVDGRFEHIARRLGLNHPMTLLQPSTFDWARQALCYLPPGLPNPAAHGFGATLIEALIPVLEAS
SGRAFLLFASHRALREAATALRGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFREGVDVAGEALSVVVIDKLPFTA
PDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGRLIRSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDIA
EVRAFFNGSNTAPTESRHDSPISHRQASGVDRIG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=633, Percent_Identity=43.7598736176935, Blast_Score=497, Evalue=1e-142,
Organism=Escherichia coli, GI1787018, Length=706, Percent_Identity=28.7535410764873, Blast_Score=169, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 73413; Mature: 73281

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEAGTGTGKTF
CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPTLLSGLKTIISTGTRALQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKYRLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH
QTCAAPHLGTAEQTTQLQRILTWSGRTQFGDMAELDTLPDDSPLLPLVTSTLDNCLGKDC
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCC
PFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPAL
CCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHH
AANFFGESFGMRPLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRG
HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TQSRLLAKPEVCEGFETLITALTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGET
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQAHRETSMAAWVFTSATLAVD
HHCCCCCCCCCCCCCEEEEEEHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC
GRFEHIARRLGLNHPMTLLQPSTFDWARQALCYLPPGLPNPAAHGFGATLIEALIPVLEA
CHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
SSGRAFLLFASHRALREAATALRGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFRE
CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHEECCCEEEEECCHHHC
GVDVAGEALSVVVIDKLPFTAPDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGR
CCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIRSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDIAEVRAFFNGSNTAPTESRHD
HHHCCCCCCEEEEECCHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
SPISHRQASGVDRIG
CCCCHHHHCCCCCCC
>Mature Secondary Structure 
SMLSRASIEALSDGGLLARQLDNFVPRPGQQRLTAAIGEVFEQRNILLAEAGTGTGKTF
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPTLLSGLKTIISTGTRALQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKYRLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH
QTCAAPHLGTAEQTTQLQRILTWSGRTQFGDMAELDTLPDDSPLLPLVTSTLDNCLGKDC
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCC
PFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQEGFGEILPGAQAFIIDEAHQLPAL
CCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHH
AANFFGESFGMRPLQELGRDCMIEARSVAGAQAALQHSVWQLEQALRTLRAAMEGLPSRG
HHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TQSRLLAKPEVCEGFETLITALTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGET
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AETSGLEGDTPSNNDVLWYELTQRGFRCQRTPLDVSAQLQAHRETSMAAWVFTSATLAVD
HHCCCCCCCCCCCCCEEEEEEHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC
GRFEHIARRLGLNHPMTLLQPSTFDWARQALCYLPPGLPNPAAHGFGATLIEALIPVLEA
CHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
SSGRAFLLFASHRALREAATALRGGPWPLFVQGDAPRATLLDRFRVSGNGLLLGSASFRE
CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHEECCCEEEEECCHHHC
GVDVAGEALSVVVIDKLPFTAPDDPVFEARLEAIRQEGGNPFFDEQLPQAVIALKQGVGR
CCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LIRSESDRGVLVLCDPRLLSKSYGRIFLDSLPSFPQTRDIAEVRAFFNGSNTAPTESRHD
HHHCCCCCCEEEEECCHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
SPISHRQASGVDRIG
CCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]