Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682407
Identifier: 182682407
GI number: 182682407
Start: 2096236
End: 2097114
Strand: Reverse
Name: 182682407
Synonym: XfasM23_1893
Alternate gene names: NA
Gene position: 2097114-2096236 (Counterclockwise)
Preceding gene: 182682408
Following gene: 182682406
Centisome position: 82.7
GC content: 60.07
Gene sequence:
>879_bases GTGACGGGCTGGGCGATCCCCTGGAGGCCGCTCATCACTCAAGTCATGAACCGCCTTTATATTCAGGACAGCGGCCAAAC CTACCGCAACACCACCTACCAGGCTTATACCAAACCCACCCACCAGCTGGGGGAACTGGTGACCGCCGGCATTGAGAAAC TGCTGGAGATCACCAAAATCGCCAGCCCTGCCTCGCGGCTCCAGGCCGCGGCGGCCAAAGAGGTGATGTATAACGCCGAG GACAAAAAATATACAAATCCGATCTATCTAGAGGGCCACAGCCGCGGCACCATGACCCTCAGCAATGCGTTGCGGCTACT CGCCGCGGATCATGTGTTTGGAAAAAACCTTGAAATACTGGCCTACAACCCTGCCGCGGAAGGGGGGCGCCTGACCGAGG CCGCTGCCTTGGTGACCAGCAATTCAGTCGACATCTGGTCACCACGCAAGGACTTTGTGGCTAACAAGATTGGCGGCTAT GCCGGCGATGCCACCTTCCATGATCTGCGGGAGATCTTCCAAACCAACTACTCCGTGCACAGCAGCGGCGGCACCGCCGC CCTGGGTAGCGACTCAAACCATGTCGATAAAGACAAACTGTTTAGCTTTCTTGGCCTGGATATCAACGATATGAACGCCA AGCGTCAGGGGCGGACCATCGGGCTGCTGGAGCAATGGCAGAAGACACCCCGCCCAGAGGACCCGGTGGCGACCCAACTC ACCCAACTGCAACGCCTGCTGTGGCAATCCCAGCAGTGGCAACAGCAGCTGGACACCACCCCGGGGGTGCTGACACGGCC CACCCCGACCACCCCGGACGCCCCCAGCGCCCGGCAACAGCACCTCCAGCAGTTGCGCCAGTCCCTCACCCCACATTAA
Upstream 100 bases:
>100_bases TGAACTTTATTGAAGCCGCCCGCCAAAAAAACACCGAAGACTACCAACGCGCCCGCAAACTGATGGACGGCATCTTGCAA TCGGTGGTGATCCAGAAGCA
Downstream 100 bases:
>100_bases GGAGCCTTCTCCATGCAACGACGTCCCTTACTCGGTGTATCCCTACTCGCCGCCAGCCTGTTGCTGGCCGGCTGCAGCAG TGGCCCCCCCATCGACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLQAAAAKEVMYNAE DKKYTNPIYLEGHSRGTMTLSNALRLLAADHVFGKNLEILAYNPAAEGGRLTEAAALVTSNSVDIWSPRKDFVANKIGGY AGDATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKDKLFSFLGLDINDMNAKRQGRTIGLLEQWQKTPRPEDPVATQL TQLQRLLWQSQQWQQQLDTTPGVLTRPTPTTPDAPSARQQHLQQLRQSLTPH
Sequences:
>Translated_292_residues MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLQAAAAKEVMYNAE DKKYTNPIYLEGHSRGTMTLSNALRLLAADHVFGKNLEILAYNPAAEGGRLTEAAALVTSNSVDIWSPRKDFVANKIGGY AGDATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKDKLFSFLGLDINDMNAKRQGRTIGLLEQWQKTPRPEDPVATQL TQLQRLLWQSQQWQQQLDTTPGVLTRPTPTTPDAPSARQQHLQQLRQSLTPH >Mature_291_residues TGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKIASPASRLQAAAAKEVMYNAED KKYTNPIYLEGHSRGTMTLSNALRLLAADHVFGKNLEILAYNPAAEGGRLTEAAALVTSNSVDIWSPRKDFVANKIGGYA GDATFHDLREIFQTNYSVHSSGGTAALGSDSNHVDKDKLFSFLGLDINDMNAKRQGRTIGLLEQWQKTPRPEDPVATQLT QLQRLLWQSQQWQQQLDTTPGVLTRPTPTTPDAPSARQQHLQQLRQSLTPH
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32525; Mature: 32394
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKI CCCCCCCHHHHHHHHHHHHEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH ASPASRLQAAAAKEVMYNAEDKKYTNPIYLEGHSRGTMTLSNALRLLAADHVFGKNLEIL CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE AYNPAAEGGRLTEAAALVTSNSVDIWSPRKDFVANKIGGYAGDATFHDLREIFQTNYSVH EECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEE SSGGTAALGSDSNHVDKDKLFSFLGLDINDMNAKRQGRTIGLLEQWQKTPRPEDPVATQL CCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEHHHHHHHHCCCCCCHHHHHH TQLQRLLWQSQQWQQQLDTTPGVLTRPTPTTPDAPSARQQHLQQLRQSLTPH HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TGWAIPWRPLITQVMNRLYIQDSGQTYRNTTYQAYTKPTHQLGELVTAGIEKLLEITKI CCCCCCHHHHHHHHHHHHEECCCCCCHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH ASPASRLQAAAAKEVMYNAEDKKYTNPIYLEGHSRGTMTLSNALRLLAADHVFGKNLEIL CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEE AYNPAAEGGRLTEAAALVTSNSVDIWSPRKDFVANKIGGYAGDATFHDLREIFQTNYSVH EECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEE SSGGTAALGSDSNHVDKDKLFSFLGLDINDMNAKRQGRTIGLLEQWQKTPRPEDPVATQL CCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHCCCEEHHHHHHHHCCCCCCHHHHHH TQLQRLLWQSQQWQQQLDTTPGVLTRPTPTTPDAPSARQQHLQQLRQSLTPH HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA