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The map label for this gene is sspB [H]

Identifier: 182682390

GI number: 182682390

Start: 2080769

End: 2081185

Strand: Reverse

Name: sspB [H]

Synonym: XfasM23_1876

Alternate gene names: 182682390

Gene position: 2081185-2080769 (Counterclockwise)

Preceding gene: 182682391

Following gene: 182682389

Centisome position: 82.08

GC content: 54.44

Gene sequence:

>417_bases
ATGACCAGTCATCGGCCCTATCTGTTACGAGCCTTGGTCGAATGGATTAACGACAATGGGATGACTCCCCATATTTTGGT
GGATGCGGGCATTCAGGGTGTGCAGGTTCCGGAAAGTGCCGTCAAGGATGGTCGGGTCGTATTGAATATTGCTGGGCGTG
CAGTGATGCATTTGCATATTGGCAATGACGGCGTCAGCTTTAATGCCCGTTTCGGTGGAGTCAGCTATCCGGTGCAGGTC
CCAATGCAAGCGTTATTAGCGGTGTATGCACGTGAAACAGGGCAGGGTATGGCCTTACCAGACGATATCCAGGGTGAGCC
GCCGGAAGATGTGCCGCCACCACCTGAGACCCCGAGTGGCGGCAAAGATACGTCCCCTGTTTCTGGGAAGCGATCGCACT
TGCGCGTAGTGAAGTAA

Upstream 100 bases:

>100_bases
GAGTCTGACTGACCAGGAAAAGAAGTTACGTGACTTTGTTGTTTGATAGCCATGTCTTGCGTTCGAGCATACACTGTTGG
TTATGAGTAAATTTCCACGA

Downstream 100 bases:

>100_bases
TAACAAGCAGTTGAGGACTATGACCCAATCCCGTTGGCGTTTGGATGGTCGTACGGCTTTGATCACGGGGGCTAGTACAG
GTATCGGTCTGGCTGTTGCT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTSHRPYLLRALVEWINDNGMTPHILVDAGIQGVQVPESAVKDGRVVLNIAGRAVMHLHIGNDGVSFNARFGGVSYPVQV
PMQALLAVYARETGQGMALPDDIQGEPPEDVPPPPETPSGGKDTSPVSGKRSHLRVVK

Sequences:

>Translated_138_residues
MTSHRPYLLRALVEWINDNGMTPHILVDAGIQGVQVPESAVKDGRVVLNIAGRAVMHLHIGNDGVSFNARFGGVSYPVQV
PMQALLAVYARETGQGMALPDDIQGEPPEDVPPPPETPSGGKDTSPVSGKRSHLRVVK
>Mature_137_residues
TSHRPYLLRALVEWINDNGMTPHILVDAGIQGVQVPESAVKDGRVVLNIAGRAVMHLHIGNDGVSFNARFGGVSYPVQVP
MQALLAVYARETGQGMALPDDIQGEPPEDVPPPPETPSGGKDTSPVSGKRSHLRVVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=96, Percent_Identity=57.2916666666667, Blast_Score=118, Evalue=1e-28,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 14751; Mature: 14620

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSHRPYLLRALVEWINDNGMTPHILVDAGIQGVQVPESAVKDGRVVLNIAGRAVMHLHI
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCEEEEEECCCEEEEEEE
GNDGVSFNARFGGVSYPVQVPMQALLAVYARETGQGMALPDDIQGEPPEDVPPPPETPSG
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDTSPVSGKRSHLRVVK
CCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TSHRPYLLRALVEWINDNGMTPHILVDAGIQGVQVPESAVKDGRVVLNIAGRAVMHLHI
CCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCEEEEEECCCEEEEEEE
GNDGVSFNARFGGVSYPVQVPMQALLAVYARETGQGMALPDDIQGEPPEDVPPPPETPSG
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDTSPVSGKRSHLRVVK
CCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]