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The map label for this gene is yfiO [C]

Identifier: 182682371

GI number: 182682371

Start: 2060932

End: 2061813

Strand: Direct

Name: yfiO [C]

Synonym: XfasM23_1857

Alternate gene names: 182682371

Gene position: 2060932-2061813 (Clockwise)

Preceding gene: 182682367

Following gene: 182682380

Centisome position: 81.28

GC content: 53.29

Gene sequence:

>882_bases
ATGATCCAACGTCCTACCTTCTTCTCACCTATCCACCTGTTGGCCGTGCTACTGGCTACCTTCATCCTCATCACCGGCTG
TCACCGCGAAACCAAAAAGAACGCTGATGATGGCATGCCGGTGGAACATCTGTACGACAAGGCACACACGCTCATGAAGA
AAGGTAACTGGGCCGGTGCCGAGCTCAGCTTCAAGCGCCTCATTGCCCAATACCCGTATGGCCCGTATACCGAACAAGCA
ATGGTCGAGAACGCCTACGCACAGTACAAGTCGGGAAAACACGACGACGCTGTATCATCAATCGACCGCTTCATACGCAC
TTACCCGACGCACCATAACATCCCCTATATGTACTACCTGCGTGGCCTGAGCAACAGCAACCGCGACACCATATTTTTAC
GCAAAGTCTGGTCACTGGACCTCAGTCGCCGTGACTTATCCGCCCCACAGCAAGCCTACAACGACTTCAAAACGGTTCTG
GATCGCTACCCAAACAGCCGTTACGCTACCGATGCCAAGAAGCAAATGACTGAGCTGCGTAACATGTTCGCCCAATACGA
GATGAACGTTACACTCTACTACCTGCGCCGCACGGCTTGGGTCGCAGCCGCAGGCCGCGCCAACTTTCTGCTAGAAACCT
ACCCACAGAGCCCCTTCCAATACGATGCAGTGGCCGCCCTTGGAGAGGCTTACACCCATTTGGGTAACAAGACACTTGCA
GACAATGCACGCCAGGTATTGCAAACCAATGCCCCCGACCATCCTTGGCTCAAAGGCAAAAAATGGCCCAAATACCCGGC
AGCAATCCGCAAGCTGAACCCATTCGCAGGTGAAAAATCAGCAGCAACCGGACAGACTAACGCCGTTGTAAATTCCAATT
AA

Upstream 100 bases:

>100_bases
ACAACGAAATTCGGCACTAGAGGGAGCATAAGTCAGTCACAAGACATGCCATTAGGCTATCATCAATGCTTCATATTATT
GATGCGTGCCACGCAAACCC

Downstream 100 bases:

>100_bases
GTATCACCCAAGACGTCCTTCATCTGGATACAAACGCAAGCACAACGACACTAGCTTTACGACTGATTTTATAGATCCAA
AACTTGGTCGCTCATTGCTT

Product: competence lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIQRPTFFSPIHLLAVLLATFILITGCHRETKKNADDGMPVEHLYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYTEQA
MVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSNRDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVL
DRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLA
DNARQVLQTNAPDHPWLKGKKWPKYPAAIRKLNPFAGEKSAATGQTNAVVNSN

Sequences:

>Translated_293_residues
MIQRPTFFSPIHLLAVLLATFILITGCHRETKKNADDGMPVEHLYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYTEQA
MVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSNRDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVL
DRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLA
DNARQVLQTNAPDHPWLKGKKWPKYPAAIRKLNPFAGEKSAATGQTNAVVNSN
>Mature_293_residues
MIQRPTFFSPIHLLAVLLATFILITGCHRETKKNADDGMPVEHLYDKAHTLMKKGNWAGAELSFKRLIAQYPYGPYTEQA
MVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYLRGLSNSNRDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVL
DRYPNSRYATDAKKQMTELRNMFAQYEMNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLA
DNARQVLQTNAPDHPWLKGKKWPKYPAAIRKLNPFAGEKSAATGQTNAVVNSN

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats

Homologues:

Organism=Escherichia coli, GI1788947, Length=230, Percent_Identity=34.3478260869565, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1756_XYLFT (Q87AR6)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779941.1
- STRING:   Q87AR6
- GeneID:   1143098
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1756
- eggNOG:   COG4105
- HOGENOM:   HBG739476
- OMA:   RMQYIVN
- ProtClustDB:   CLSK446128
- BioCyc:   XFAS183190:PD_1756-MONOMER
- GO:   GO:0005488
- InterPro:   IPR017689
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10
- TIGRFAMs:   TIGR03302

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33532; Mature: 33532

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS50005 TPR; PS50293 TPR_REGION; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRPTFFSPIHLLAVLLATFILITGCHRETKKNADDGMPVEHLYDKAHTLMKKGNWAGA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
ELSFKRLIAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
RGLSNSNRDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELR
ECCCCCCCCEEEEEHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NMFAQYEMNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLA
HHHHHHHCCEEEEEEHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
DNARQVLQTNAPDHPWLKGKKWPKYPAAIRKLNPFAGEKSAATGQTNAVVNSN
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MIQRPTFFSPIHLLAVLLATFILITGCHRETKKNADDGMPVEHLYDKAHTLMKKGNWAGA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
ELSFKRLIAQYPYGPYTEQAMVENAYAQYKSGKHDDAVSSIDRFIRTYPTHHNIPYMYYL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
RGLSNSNRDTIFLRKVWSLDLSRRDLSAPQQAYNDFKTVLDRYPNSRYATDAKKQMTELR
ECCCCCCCCEEEEEHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NMFAQYEMNVTLYYLRRTAWVAAAGRANFLLETYPQSPFQYDAVAALGEAYTHLGNKTLA
HHHHHHHCCEEEEEEHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
DNARQVLQTNAPDHPWLKGKKWPKYPAAIRKLNPFAGEKSAATGQTNAVVNSN
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478