Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yuxK [H]
Identifier: 182682368
GI number: 182682368
Start: 2058126
End: 2058584
Strand: Reverse
Name: yuxK [H]
Synonym: XfasM23_1854
Alternate gene names: 182682368
Gene position: 2058584-2058126 (Counterclockwise)
Preceding gene: 182682369
Following gene: 182682365
Centisome position: 81.18
GC content: 54.47
Gene sequence:
>459_bases GTGTCGGTGCCGATGGTGGAACCGTTGATCTGTGATGAGGGTGTGTTGCGTCAGGTTGATACGACTACTGCGGTGATTGT CTTCGATGGCGTCTGCGTACTATGTAATGGTTGGGTGCGTTTCTTGCTACGCCGTGATCGAAAAAAACGCTACCGTTTTG CCGCGATGCAGGGGCAGCATGGTGGGGCGCTGTTACGTGCATATGGGTTGGATCCGGAGGATCCGCTTTCGTTCTTGCTG GTTGAGGATGGAAAGGGGTGGAGTGATTCGGATGCGGTGTTACGTGTATTAGTTGGTTTGGGTGGTTTTTGGCGCGTTGC TGCTTGCTTGTACGTGTTGCCGCGTCGTTGGACAGATGCTGGTTATCGTTGGTTGGCGCGTAATCGCTATCGTTGGTTTG GGCGCCATGAGCAGTGTCTGCTGCCCGAGCCGGAAGAGCGTGAGCGCTTCTTTGATTGA
Upstream 100 bases:
>100_bases GGTATGGGGTCTGGGCTGGTTGCTGTAATCGGTACGTTGGTTCTACGGTTGGGGGAATGGTGAGTCGGTTAAGGATGGGC GCTGCTGTTTTTGGGTTGCT
Downstream 100 bases:
>100_bases TGTTTTTGCACTTTATTTAGTGCGGTGATGCGGTGTGCTTTGGTGCGGGTATATGCAGCTGATGCTTTATGGTGGCAAGC AAATGTTGTTGCAAGAAATA
Product: putative thiol-disulfide oxidoreductase DCC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSVPMVEPLICDEGVLRQVDTTTAVIVFDGVCVLCNGWVRFLLRRDRKKRYRFAAMQGQHGGALLRAYGLDPEDPLSFLL VEDGKGWSDSDAVLRVLVGLGGFWRVAACLYVLPRRWTDAGYRWLARNRYRWFGRHEQCLLPEPEERERFFD
Sequences:
>Translated_152_residues MSVPMVEPLICDEGVLRQVDTTTAVIVFDGVCVLCNGWVRFLLRRDRKKRYRFAAMQGQHGGALLRAYGLDPEDPLSFLL VEDGKGWSDSDAVLRVLVGLGGFWRVAACLYVLPRRWTDAGYRWLARNRYRWFGRHEQCLLPEPEERERFFD >Mature_151_residues SVPMVEPLICDEGVLRQVDTTTAVIVFDGVCVLCNGWVRFLLRRDRKKRYRFAAMQGQHGGALLRAYGLDPEDPLSFLLV EDGKGWSDSDAVLRVLVGLGGFWRVAACLYVLPRRWTDAGYRWLARNRYRWFGRHEQCLLPEPEERERFFD
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 17639; Mature: 17507
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPMVEPLICDEGVLRQVDTTTAVIVFDGVCVLCNGWVRFLLRRDRKKRYRFAAMQGQH CCCCCCCCHHCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGALLRAYGLDPEDPLSFLLVEDGKGWSDSDAVLRVLVGLGGFWRVAACLYVLPRRWTDA CCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH GYRWLARNRYRWFGRHEQCLLPEPEERERFFD HHHHHHCCCHHHCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure SVPMVEPLICDEGVLRQVDTTTAVIVFDGVCVLCNGWVRFLLRRDRKKRYRFAAMQGQH CCCCCCCHHCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGALLRAYGLDPEDPLSFLLVEDGKGWSDSDAVLRVLVGLGGFWRVAACLYVLPRRWTDA CCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH GYRWLARNRYRWFGRHEQCLLPEPEERERFFD HHHHHHCCCHHHCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]