Click here to switch to the map view.

The map label for this gene is 182682343

Identifier: 182682343

GI number: 182682343

Start: 2030495

End: 2032675

Strand: Direct

Name: 182682343

Synonym: XfasM23_1826

Alternate gene names: NA

Gene position: 2030495-2032675 (Clockwise)

Preceding gene: 182682342

Following gene: 182682344

Centisome position: 80.08

GC content: 62.72

Gene sequence:

>2181_bases
ATGGCCACCGCGCAGCCACCCGCACCGATCCTATGGGGGGACCTAGAGACGTACTCCCCCGTCCCGATTGCCCATGGCGT
GCATGCGTATGCCGAGCAAGCACAACTGTTGCTGTTTGCTTACGCCTTGGGTGAGGGGCCGGTGCAGGTGTGGGACTGCA
CCGCCACGGCAACGATGCCTGAGGAGCTGTCGGCTGCGCTGCACAACCCCGCGGTGCTGCTGTATTTCCACAACTCCCAT
TTTGACCGAACCGTACTACGCCATTGCGGCATCAGCATCCCCTTGGAGCGCTGGCGCGATTCAATGGCCCAGGCCTTGGC
CCATGCGCTGCCTGGGGCGCTGGGTACGCTATGCGAGCTGCTGCGCGTTCCTGTGGAGCAAGCCAAGGCCAAGGACGGCA
AACGGCTCGTTGCACTGTTTTGCAAACCACGCCCGACCCACTGCACGTTGCGCCGTGCCACACGTGACACCCATCCGACC
GAATGGGCACAGTTTGTGGAGTACGCCAGGCGCGATGTGACGGCCATGCGGGACGTGGTGAAGCGCTTGCCGTCCCACAA
CTACACGGGGGCGGAGCTGGCGCTGTGGTTTCTGGACCAAACTATTAATGACCGAGGCGTTCTGGTCGATACGGACTTAG
CGCAGGCCGCCATCGGCGCTGTGGAACGCGCCAAGCAAGCATTGGCCGAGCGCACCAGTGACCTCACAGCAGGAGTGGTG
CAGGCGGCAACCCAGCGCGATGCACTGTTACACCACCTGAGCACCGCGCACGGCGTGGCGTTGCCGGACATGCAGCAACA
CACGGTAGAGCGTTGCCTTGACGATCCGCTGTTGCCAGAGACGGTGCGGGAACTGCTGTCCATCCGCAGGCAAGCCAGCA
CCACCAGCACCGCTAAGTATCAGGCGCTGCTGAACTGCACCAGCCGCGATGGCCGCCTGCGCGGCACGCTGCAATTCAAC
GGGGCCAGTCGCACCGGACGGTGGGCGGGGCGGCTGTTTCAGCCGCACAACCTGCCCCGCCCCACGCTCAGCCAAGAAGC
GATCACGGTTGGCATTGATGCCATGAAAGCCGGTTGTGTGGATTTAGTATTTGACGATGTCATGGCGCTGACCAGCAGCG
CGCTGCGCAGCTGTCTGATTGCACCAACCCATAAAAAGCTGGTCGTGGCCGATCTGTCCAACATTGAAGGCCGCGTATTG
GCGTGGCTGGCCGGTGAAACCCCCAAGCTGCACGCGTTTGGTGAGTTTGATACCTGCCAAGGGGTGGATGGTACATGGCA
CAGCGGCGAGGCCATCACTCACGGCGCACTGCGCGGGGCACCGATCGCCTTGCAATGGAATGCCGAGCACGCGCCTATTC
GCAAAGGGGACGACATTTACAAGCGCGCCTACGCCCATTCGTTCGGGATAGCGCCCCAGGCCGTGACCAAGCAGCAACGC
CAAATCGGCAAAGTGCAGGAATTGGCCTTGGGGTATGGCGGCGGTGTCGGGGCCTTTGCCGCCTTTGCGGCCATGTATCA
CATTGATTTGGAGGCGATGGCCGCGCAGGCCGCCTTACCGCCGCTGCTACTTCAGGAGGCAACGGAACTGCTTGAATGGA
CCAAGGCCAACCACCGTCCCACCTTCGGCCTCTCAGATCGCGCATGGTTGGCCTGCGATGTGTTTAAGCGCGCATGGCGC
AACGCGCATCCGGCCATTGCCGCGTTTTGGCAGGCGTTGCAGTGCGCAGTCACAGACGCCATCGGCCACCCCGAAACGGC
GCACACCTGCTGCGGTATCACCGTGCAGTACAGCCGTGCATGGCTGCGTCTGCGTCTGCCGTCGGGGCGGGTGCTTTACT
ACGCCGCTCCCAGAGTCGATGAGCACGGCGCGCTGTCCTACATGGGCACGCATCCGGTAACGCGCAAATGGACGCGCATC
ACCACCTACGGCGGCAAGCTGGTCGAGAACATCACCCAAGCTGTCAGCCGCGACGTGTTGGCCGCCTGCATGCCTGCGAT
TGAAGCCGCCGGATACAGCATCGTGCTTACCGTGCACGACGAAATCATTACCGAAGCCGATGACAACGCCGCTTTCAATG
CCGCGCACTTGGCCGCACTCATGGCCACACCGCCCCCCTGGGCACAAGGGTTGCCCTTAGCGGCGGAAGGCTTTGAAACC
CACCGGTATAGGAAGCAATGA

Upstream 100 bases:

>100_bases
GTATGGGGCGAAGCCATTCCGTACTCACGCAACGGGCATAGCAGCTACCAAATTCTCTGGAATCCGACGGTGGTTGACTC
GCTGAAGGTCGCCGCCTGAG

Downstream 100 bases:

>100_bases
TGACCATTCCCCGTGAGCGGACAATCGAACGTTATTTAGTGGCCCAGGTCAGGGCCAAGGGCGGTGAAATCCGCAAGGTG
AAATGGGGGGGCCGCCACGG

Product: DNA-directed DNA polymerase

Products: NA

Alternate protein names: DNA Polymerase; DNA Polymerase I; DNA Polymerase Bacteriophage Origin; Phage Related DNA Polymerase; Phage-Related DNA Polymerase; Family A DNA-Dependent DNA Polymerase; Prophage DNA Polymerase; Phage DNA-Directed DNA Polymerase; DNA-Dependent DNA Polymerase Family A; Prophage; DNA-Directed DNA Polymerase I; DNA Polymerase I Domain Protein; Truncated Phage-Related DNA Polymerase; DNA-Directed Dna Polymerase I; APSE-2 Prophage

Number of amino acids: Translated: 726; Mature: 725

Protein sequence:

>726_residues
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQVWDCTATATMPEELSAALHNPAVLLYFHNSH
FDRTVLRHCGISIPLERWRDSMAQALAHALPGALGTLCELLRVPVEQAKAKDGKRLVALFCKPRPTHCTLRRATRDTHPT
EWAQFVEYARRDVTAMRDVVKRLPSHNYTGAELALWFLDQTINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVV
QAATQRDALLHHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKYQALLNCTSRDGRLRGTLQFN
GASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVL
AWLAGETPKLHAFGEFDTCQGVDGTWHSGEAITHGALRGAPIALQWNAEHAPIRKGDDIYKRAYAHSFGIAPQAVTKQQR
QIGKVQELALGYGGGVGAFAAFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRPTFGLSDRAWLACDVFKRAWR
NAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRAWLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRI
TTYGGKLVENITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAALMATPPPWAQGLPLAAEGFET
HRYRKQ

Sequences:

>Translated_726_residues
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQVWDCTATATMPEELSAALHNPAVLLYFHNSH
FDRTVLRHCGISIPLERWRDSMAQALAHALPGALGTLCELLRVPVEQAKAKDGKRLVALFCKPRPTHCTLRRATRDTHPT
EWAQFVEYARRDVTAMRDVVKRLPSHNYTGAELALWFLDQTINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVV
QAATQRDALLHHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKYQALLNCTSRDGRLRGTLQFN
GASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVL
AWLAGETPKLHAFGEFDTCQGVDGTWHSGEAITHGALRGAPIALQWNAEHAPIRKGDDIYKRAYAHSFGIAPQAVTKQQR
QIGKVQELALGYGGGVGAFAAFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRPTFGLSDRAWLACDVFKRAWR
NAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRAWLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRI
TTYGGKLVENITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAALMATPPPWAQGLPLAAEGFET
HRYRKQ
>Mature_725_residues
ATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQVWDCTATATMPEELSAALHNPAVLLYFHNSHF
DRTVLRHCGISIPLERWRDSMAQALAHALPGALGTLCELLRVPVEQAKAKDGKRLVALFCKPRPTHCTLRRATRDTHPTE
WAQFVEYARRDVTAMRDVVKRLPSHNYTGAELALWFLDQTINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVVQ
AATQRDALLHHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKYQALLNCTSRDGRLRGTLQFNG
ASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVLA
WLAGETPKLHAFGEFDTCQGVDGTWHSGEAITHGALRGAPIALQWNAEHAPIRKGDDIYKRAYAHSFGIAPQAVTKQQRQ
IGKVQELALGYGGGVGAFAAFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRPTFGLSDRAWLACDVFKRAWRN
AHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRAWLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRIT
TYGGKLVENITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAALMATPPPWAQGLPLAAEGFETH
RYRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79390; Mature: 79259

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQVWDCTATATMP
CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH
EELSAALHNPAVLLYFHNSHFDRTVLRHCGISIPLERWRDSMAQALAHALPGALGTLCEL
HHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
LRVPVEQAKAKDGKRLVALFCKPRPTHCTLRRATRDTHPTEWAQFVEYARRDVTAMRDVV
HHCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KRLPSHNYTGAELALWFLDQTINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVV
HHCCCCCCCCHHHHHEEHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAATQRDALLHHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHH
QALLNCTSRDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGCV
HHHHHCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHH
DLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVLAWLAGETPKLHAFGEFDTCQ
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCC
GVDGTWHSGEAITHGALRGAPIALQWNAEHAPIRKGDDIYKRAYAHSFGIAPQAVTKQQR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QIGKVQELALGYGGGVGAFAAFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
TFGLSDRAWLACDVFKRAWRNAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRA
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCE
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRITTYGGKLVENITQAVSRDVL
EEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
AACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAALMATPPPWAQGLPLAAEGFET
HHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
HRYRKQ
HHCCCC
>Mature Secondary Structure 
ATAQPPAPILWGDLETYSPVPIAHGVHAYAEQAQLLLFAYALGEGPVQVWDCTATATMP
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH
EELSAALHNPAVLLYFHNSHFDRTVLRHCGISIPLERWRDSMAQALAHALPGALGTLCEL
HHHHHHHCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
LRVPVEQAKAKDGKRLVALFCKPRPTHCTLRRATRDTHPTEWAQFVEYARRDVTAMRDVV
HHCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KRLPSHNYTGAELALWFLDQTINDRGVLVDTDLAQAAIGAVERAKQALAERTSDLTAGVV
HHCCCCCCCCHHHHHEEHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAATQRDALLHHLSTAHGVALPDMQQHTVERCLDDPLLPETVRELLSIRRQASTTSTAKY
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHH
QALLNCTSRDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEAITVGIDAMKAGCV
HHHHHCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHEEEHHHHHHHHH
DLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVLAWLAGETPKLHAFGEFDTCQ
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCC
GVDGTWHSGEAITHGALRGAPIALQWNAEHAPIRKGDDIYKRAYAHSFGIAPQAVTKQQR
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
QIGKVQELALGYGGGVGAFAAFAAMYHIDLEAMAAQAALPPLLLQEATELLEWTKANHRP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
TFGLSDRAWLACDVFKRAWRNAHPAIAAFWQALQCAVTDAIGHPETAHTCCGITVQYSRA
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCE
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPVTRKWTRITTYGGKLVENITQAVSRDVL
EEEEECCCCCEEEEECCCCCCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
AACMPAIEAAGYSIVLTVHDEIITEADDNAAFNAAHLAALMATPPPWAQGLPLAAEGFET
HHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
HRYRKQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA