Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682328
Identifier: 182682328
GI number: 182682328
Start: 2022128
End: 2022667
Strand: Direct
Name: 182682328
Synonym: XfasM23_1811
Alternate gene names: NA
Gene position: 2022128-2022667 (Clockwise)
Preceding gene: 182682327
Following gene: 182682329
Centisome position: 79.75
GC content: 53.33
Gene sequence:
>540_bases ATGCTATTGGACATGGACGCCAAAAATACCGAATTGCATACCATGCGATGGGAACTCCTGTGGGGGGCCCAGAAGTCACA GCGCTATCATTCCTGCCGTATGGCGTTCTTTGACCGCTGTAACACGCTGAGTTCTTTTATCGGTCTATTGGGCGCTTCCG CCGTCGTTGCTTCGTTCGGCAAGTACACAGCAGAGTGGATGGCTGTTGCCGGAGCAGTCACCGTCACCATCGCCACCAGT ATTAATCTGGTGGCTGGAACGGCACAGATGGCCCGTATCCATAGCGACCTACGCCGCCGCTTCTCTCAACTTGAGTCCGA CATCGTCAAGCATCCACACGCAACGCAAGAACAAGTTTCTGCCTGGACTGCACAGCGTCTGGAGATAGAAAGCGATGAGC CGCCTATCTTTGTTGCCTTGGATATTTTGTGTGAAAACCAGGTGACGCGATCTTATGCCCATCTAAAGGACCACCCATCG CGCAAACTGCCCTGGTTCAAGCGTTTTACGGCTCAGTGGTTGACGTGGGGGAATGCATAA
Upstream 100 bases:
>100_bases TGAATGTGTAGATTAATTGCGACCGCTCACCATCGCTTAAAAAGATGGAGACAGTTCATGTGATTGGCCGCGTGATCGGC AAGACCAGCACCATAGCGCT
Downstream 100 bases:
>100_bases CTTGCGATGAGGAAAGATCACCATGCGCCCCTCTGCTGCACTTGAGATGAAGCGCACCGCAGTGCGTGAAGCGGTAGGCC GCTTCCGCGCCGCTAACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MLLDMDAKNTELHTMRWELLWGAQKSQRYHSCRMAFFDRCNTLSSFIGLLGASAVVASFGKYTAEWMAVAGAVTVTIATS INLVAGTAQMARIHSDLRRRFSQLESDIVKHPHATQEQVSAWTAQRLEIESDEPPIFVALDILCENQVTRSYAHLKDHPS RKLPWFKRFTAQWLTWGNA
Sequences:
>Translated_179_residues MLLDMDAKNTELHTMRWELLWGAQKSQRYHSCRMAFFDRCNTLSSFIGLLGASAVVASFGKYTAEWMAVAGAVTVTIATS INLVAGTAQMARIHSDLRRRFSQLESDIVKHPHATQEQVSAWTAQRLEIESDEPPIFVALDILCENQVTRSYAHLKDHPS RKLPWFKRFTAQWLTWGNA >Mature_179_residues MLLDMDAKNTELHTMRWELLWGAQKSQRYHSCRMAFFDRCNTLSSFIGLLGASAVVASFGKYTAEWMAVAGAVTVTIATS INLVAGTAQMARIHSDLRRRFSQLESDIVKHPHATQEQVSAWTAQRLEIESDEPPIFVALDILCENQVTRSYAHLKDHPS RKLPWFKRFTAQWLTWGNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20354; Mature: 20354
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDMDAKNTELHTMRWELLWGAQKSQRYHSCRMAFFDRCNTLSSFIGLLGASAVVASFG CEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYTAEWMAVAGAVTVTIATSINLVAGTAQMARIHSDLRRRFSQLESDIVKHPHATQEQVS HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AWTAQRLEIESDEPPIFVALDILCENQVTRSYAHLKDHPSRKLPWFKRFTAQWLTWGNA HHHHHHEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLLDMDAKNTELHTMRWELLWGAQKSQRYHSCRMAFFDRCNTLSSFIGLLGASAVVASFG CEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYTAEWMAVAGAVTVTIATSINLVAGTAQMARIHSDLRRRFSQLESDIVKHPHATQEQVS HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AWTAQRLEIESDEPPIFVALDILCENQVTRSYAHLKDHPSRKLPWFKRFTAQWLTWGNA HHHHHHEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA