Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682294
Identifier: 182682294
GI number: 182682294
Start: 1970672
End: 1971082
Strand: Direct
Name: 182682294
Synonym: XfasM23_1777
Alternate gene names: NA
Gene position: 1970672-1971082 (Clockwise)
Preceding gene: 182682284
Following gene: 182682295
Centisome position: 77.72
GC content: 49.88
Gene sequence:
>411_bases ATGCTAGGACACACATTCCGTCATCGACTAGATCACTTCGGTGCAACCGGTTCACTGCTATGCGCATTACACTGCGCGGT GCTACCACTGTTACTTGTCATCGCCCCGGCCTCTGGGTTCCTGCTATGGTTTGGAGATGGGGTTGAACAGGTGATCGTGA TATCGGTGACCTTACTTGCTCTGTTCAGCCTAATACTCAGTTACTTCAAGCACCACGCTTGGCGCGCCATCAGCGTTTTA TTGCCTGGACTAACGCTATTATGGTTGGGCCTACTATACGATCCACTACACCATGCCCCGACCCTGCATGCAGTGACGAT GGCTATAGCCGGGACCTTGATTGGTATAGCACACTTGGTCAACCTACACCTTAATCATAGCCATATTGATAACACTTCCT CAAAACACTAA
Upstream 100 bases:
>100_bases GGATCTATGGTTTTAGAGATGTAATACTCTTGCCCAGCAAATAGGTAAGGTAATATTATATCATTCAAAACTCTTATGGT TATTGAAGAACATTAAAGCC
Downstream 100 bases:
>100_bases AACACAGTTGCCCTGCTCGGACAGATACCAGAGCAAATAGCATCATGATATAGTTGCCGCCCTTAGCAAGACTCCGTATT AACGCGGTGTTTAGCAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLGHTFRHRLDHFGATGSLLCALHCAVLPLLLVIAPASGFLLWFGDGVEQVIVISVTLLALFSLILSYFKHHAWRAISVL LPGLTLLWLGLLYDPLHHAPTLHAVTMAIAGTLIGIAHLVNLHLNHSHIDNTSSKH
Sequences:
>Translated_136_residues MLGHTFRHRLDHFGATGSLLCALHCAVLPLLLVIAPASGFLLWFGDGVEQVIVISVTLLALFSLILSYFKHHAWRAISVL LPGLTLLWLGLLYDPLHHAPTLHAVTMAIAGTLIGIAHLVNLHLNHSHIDNTSSKH >Mature_136_residues MLGHTFRHRLDHFGATGSLLCALHCAVLPLLLVIAPASGFLLWFGDGVEQVIVISVTLLALFSLILSYFKHHAWRAISVL LPGLTLLWLGLLYDPLHHAPTLHAVTMAIAGTLIGIAHLVNLHLNHSHIDNTSSKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14838; Mature: 14838
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHTFRHRLDHFGATGSLLCALHCAVLPLLLVIAPASGFLLWFGDGVEQVIVISVTLLA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH LFSLILSYFKHHAWRAISVLLPGLTLLWLGLLYDPLHHAPTLHAVTMAIAGTLIGIAHLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLHLNHSHIDNTSSKH HHHCCCHHCCCCCCCC >Mature Secondary Structure MLGHTFRHRLDHFGATGSLLCALHCAVLPLLLVIAPASGFLLWFGDGVEQVIVISVTLLA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH LFSLILSYFKHHAWRAISVLLPGLTLLWLGLLYDPLHHAPTLHAVTMAIAGTLIGIAHLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLHLNHSHIDNTSSKH HHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA