Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682282
Identifier: 182682282
GI number: 182682282
Start: 1952659
End: 1953096
Strand: Reverse
Name: 182682282
Synonym: XfasM23_1764
Alternate gene names: NA
Gene position: 1953096-1952659 (Counterclockwise)
Preceding gene: 182682283
Following gene: 182682281
Centisome position: 77.02
GC content: 49.77
Gene sequence:
>438_bases ATGTTTGGAAATAAGTCCAACCGTAGTGATCGTAATGTCGTCGATACTTTGATTGGTCCGCAAGCAGTGATAACTGGTGA TATCAGCTTCAGCGGAGTTTTATATGTGGAAGGGAATATATTTGGCAAAGTGATTGCCGATGAAGGCGTATCAGCAACCT TAGTCGTTGCCGAAAAGGGGCGGATTGATGGCGAAGTCCGCGCCCCGGTGATTGTGATCAATGGCAGGCTTGATGGCGAT GTTTATGCGGCTGATCGAGTTGAGCTGGGCGGCGGCGCGTGCGTCCATGGCAATGTGCATTACAAAGTTGTGGAGATGCG TGTTGGTGCGCAGTTGACTGGAAGCTTGATACATACTAATAACCAAGCTGCCTTGCCGCCTCCAGATGAACCCTTGTCAA CGCTGGAATTAGAGACATCTGTTGCAGCAGGTCCTTGA
Upstream 100 bases:
>100_bases TTCACCCCACAGCGTGTAAAAATATCCCTTGTTGGTCAAGGAATGTCTGTTACACAAACTTTCGATTGGAAGCTTGCCGC TAACAGTATTGGAGAATAGT
Downstream 100 bases:
>100_bases TTCGCCCTTCCTTTGACCTCATGCAGGCTATAGTATGACTATGCTCATTTCTTTGCCCACGGCACCATCAGTGCCTAACT ATCAGTCGCTGGAGCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MFGNKSNRSDRNVVDTLIGPQAVITGDISFSGVLYVEGNIFGKVIADEGVSATLVVAEKGRIDGEVRAPVIVINGRLDGD VYAADRVELGGGACVHGNVHYKVVEMRVGAQLTGSLIHTNNQAALPPPDEPLSTLELETSVAAGP
Sequences:
>Translated_145_residues MFGNKSNRSDRNVVDTLIGPQAVITGDISFSGVLYVEGNIFGKVIADEGVSATLVVAEKGRIDGEVRAPVIVINGRLDGD VYAADRVELGGGACVHGNVHYKVVEMRVGAQLTGSLIHTNNQAALPPPDEPLSTLELETSVAAGP >Mature_145_residues MFGNKSNRSDRNVVDTLIGPQAVITGDISFSGVLYVEGNIFGKVIADEGVSATLVVAEKGRIDGEVRAPVIVINGRLDGD VYAADRVELGGGACVHGNVHYKVVEMRVGAQLTGSLIHTNNQAALPPPDEPLSTLELETSVAAGP
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15108; Mature: 15108
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGNKSNRSDRNVVDTLIGPQAVITGDISFSGVLYVEGNIFGKVIADEGVSATLVVAEKG CCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCEEEEEEEECC RIDGEVRAPVIVINGRLDGDVYAADRVELGGGACVHGNVHYKVVEMRVGAQLTGSLIHTN CCCCCCCCCEEEEECCCCCCEEEECEEECCCCEEEECCEEEEEEEEEECCEEECEEEEEC NQAALPPPDEPLSTLELETSVAAGP CCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MFGNKSNRSDRNVVDTLIGPQAVITGDISFSGVLYVEGNIFGKVIADEGVSATLVVAEKG CCCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCEEEEEEEECC RIDGEVRAPVIVINGRLDGDVYAADRVELGGGACVHGNVHYKVVEMRVGAQLTGSLIHTN CCCCCCCCCEEEEECCCCCCEEEECEEECCCCEEEECCEEEEEEEEEECCEEECEEEEEC NQAALPPPDEPLSTLELETSVAAGP CCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA