Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 182682255
GI number: 182682255
Start: 1919522
End: 1919968
Strand: Direct
Name: yqeY [H]
Synonym: XfasM23_1737
Alternate gene names: 182682255
Gene position: 1919522-1919968 (Clockwise)
Preceding gene: 182682254
Following gene: 182682256
Centisome position: 75.7
GC content: 50.34
Gene sequence:
>447_bases ATGAGCCTAAAAGAGCAGATCACCGATGACATGAAAGCCGCCATGAAGAGCGGCGACAAACACACCGTAGGGGTCACTCG GCTGATCAACGCCGCTATCAAGCAGAAAGAAATCGACGATCGTATCCCCCTGGACAACGACGGTGTACTCACTGTTTTAC AAAAAATGGTCAAGCAACGCAGGGACTCAATCAAACAATACAGCGATGCCAACCGCGAAGACCTCGCACAGATAGAACAC GATGAAATCAAAGTCATCGAACGCTACCTACCAGCCAGACTCGGCGAAGCAGAGATTATTGCCGCAATCCAAACAGCGAT TGCAGACACTGGGGCCTCAAGTTCAGCCGATATGGGAAAACTGATGGGGGCAATCAAAACCAAACTTGCCGGCCAAGCCG ACATGGGACAAGTCTCTGCACTGGTGAAAAAACACCTGTCTCAGTAA
Upstream 100 bases:
>100_bases CACATTAAAGCGTTGGTGGTTTTTTTATCTTTACCCTGAGACATCATCAATCCAGCAAACCACCCACTGACGGCCAGTTT CCTCATTGACGGAGGCGCAC
Downstream 100 bases:
>100_bases TCCCCTCGCCCTCCAAGCCGCTAGAAAACACACTTCAGGCCAACGTACCAACTTAAAGAACAACTTATCCTGACTCGCGG GGCATCACATTCCGGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSLKEQITDDMKAAMKSGDKHTVGVTRLINAAIKQKEIDDRIPLDNDGVLTVLQKMVKQRRDSIKQYSDANREDLAQIEH DEIKVIERYLPARLGEAEIIAAIQTAIADTGASSSADMGKLMGAIKTKLAGQADMGQVSALVKKHLSQ
Sequences:
>Translated_148_residues MSLKEQITDDMKAAMKSGDKHTVGVTRLINAAIKQKEIDDRIPLDNDGVLTVLQKMVKQRRDSIKQYSDANREDLAQIEH DEIKVIERYLPARLGEAEIIAAIQTAIADTGASSSADMGKLMGAIKTKLAGQADMGQVSALVKKHLSQ >Mature_147_residues SLKEQITDDMKAAMKSGDKHTVGVTRLINAAIKQKEIDDRIPLDNDGVLTVLQKMVKQRRDSIKQYSDANREDLAQIEHD EIKVIERYLPARLGEAEIIAAIQTAIADTGASSSADMGKLMGAIKTKLAGQADMGQVSALVKKHLSQ
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16172; Mature: 16041
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKEQITDDMKAAMKSGDKHTVGVTRLINAAIKQKEIDDRIPLDNDGVLTVLQKMVKQR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RDSIKQYSDANREDLAQIEHDEIKVIERYLPARLGEAEIIAAIQTAIADTGASSSADMGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH LMGAIKTKLAGQADMGQVSALVKKHLSQ HHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLKEQITDDMKAAMKSGDKHTVGVTRLINAAIKQKEIDDRIPLDNDGVLTVLQKMVKQR CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RDSIKQYSDANREDLAQIEHDEIKVIERYLPARLGEAEIIAAIQTAIADTGASSSADMGK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH LMGAIKTKLAGQADMGQVSALVKKHLSQ HHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]