Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is purA
Identifier: 182682237
GI number: 182682237
Start: 1900465
End: 1901757
Strand: Reverse
Name: purA
Synonym: XfasM23_1719
Alternate gene names: 182682237
Gene position: 1901757-1900465 (Counterclockwise)
Preceding gene: 182682238
Following gene: 182682235
Centisome position: 75.0
GC content: 51.97
Gene sequence:
>1293_bases ATGGGTCAGTCAGTTGTCGTGCTCGGTGCCCAGTGGGGCGATGAAGGAAAGGGCAAGATCGTCGACCTTCTCACCGAGGA AATTGGTGCTGTTGTGCGTTTTCAGGGAGGTCACAATGCTGGCCACACTCTGGTTATCAATGCTAAGAAAACCGTTTTGC ATCTTATTCCATCTGGAATTTTGCGGAATGGTGTGCTCTGCTTGATTGGCAACGGTGTAGTTATCTCGCCAGCCGCATTG CGAAAGGAGATTGAGGAGCTGGAAGATACCGGTTTGGAAATACGTTCCCGTTTGAAGATTTCGCCAGCTGCGCCGTTGAT CATGGAATATCACATTGCACTGGATCAAGCACGCGAGAAAGCGGCTGGCGGTAGGGCTATTGGTACGACCGGTCGAGGGA TTGGTCCGGCGTACGAGGACAAGGTCGGGCGTCGTGGTATTCGTGTCGCTGACCTTCATTACCCAGACCAATTGGCGGAA AAGCTACGTGCTGCGTTGGATTACCACAATTTTGTGTTGACTCGATATTTTGGTGTGGATGGGATGGATTTCCAGCGGAT CTATGACGAGATGTTAGTGTTCGCTGAATACGTCGAGCCGATGAAATCTGATGTTGCGGGTATCCTCCATGACCTGCGCA AGCAAGGCAAGCGAGTGCTCTTTGAGGGTGCCCAAGGGACATTGCTGGATATCGATCACGGCACCTATCCGTACGTGACT AGCTCCAGCACGACGGTTGGTGGTGCTCTCAGTGGTGCTGGTGTTGGTGTCCAGGATATCGACTATGTGTTGGGCATTGC TAAGGCTTATGCAACTCGTGTTGGAGGTGGTCCATTTCCAACCGAGTTGGATGATAAAATTGGTCAGGGTATCCGAGATC GTGGTGTTGAGTACGGTGCTTCCACTGGTCGTCCACGCCGCTGTGGTTGGATGGACATTGTTGCGCTCAAGCGTGCTGTT GCCATCAATGGGATTACCGGTCTGTGTATTACCAAATTGGATGTGCTGGACGGAATGGATAAGCTTAAGATCTGTATCGC TTATGAGTACCACGATAAACGAAGTGAGTACGCTCCGTTGGATGCGCAAGGTTGGGAAGAATGCACCCCAGTGTACTTGG AATTTCCAGGCTGGAATGAGAGCACGCATGGCATTACTTCGTGGGAGAAACTCCCTCCAGCAGCCCGCGCTTATCTGTGT GCGCTGGAAGAGCTGGCTGGCTGTCCGATTGGTATCGTGAGCACTGGCCCAGACCGAGAGCACACGATCATGTTGCATGA TCCTTTTGCTTGA
Upstream 100 bases:
>100_bases GTGCTGTGATGGTGTCTTGAATAAAGGTGCTTAACAAATACTTGTATGTTCTATTCCGTGGCTCCTGTCGGTGCCAGAAA AATCTGAGGAGTTACCCATT
Downstream 100 bases:
>100_bases TTTCTTAGTGATTCAAGGTCGGAGGATTTATTGGGAATAATGGATGATGTGCTTGTCGTTACACATTTCCACATGTGGCC ATTTGATTTTTCCGAACCTA
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINAKKTVLHLIPSGILRNGVLCLIGNGVVISPAAL RKEIEELEDTGLEIRSRLKISPAAPLIMEYHIALDQAREKAAGGRAIGTTGRGIGPAYEDKVGRRGIRVADLHYPDQLAE KLRAALDYHNFVLTRYFGVDGMDFQRIYDEMLVFAEYVEPMKSDVAGILHDLRKQGKRVLFEGAQGTLLDIDHGTYPYVT SSSTTVGGALSGAGVGVQDIDYVLGIAKAYATRVGGGPFPTELDDKIGQGIRDRGVEYGASTGRPRRCGWMDIVALKRAV AINGITGLCITKLDVLDGMDKLKICIAYEYHDKRSEYAPLDAQGWEECTPVYLEFPGWNESTHGITSWEKLPPAARAYLC ALEELAGCPIGIVSTGPDREHTIMLHDPFA
Sequences:
>Translated_430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINAKKTVLHLIPSGILRNGVLCLIGNGVVISPAAL RKEIEELEDTGLEIRSRLKISPAAPLIMEYHIALDQAREKAAGGRAIGTTGRGIGPAYEDKVGRRGIRVADLHYPDQLAE KLRAALDYHNFVLTRYFGVDGMDFQRIYDEMLVFAEYVEPMKSDVAGILHDLRKQGKRVLFEGAQGTLLDIDHGTYPYVT SSSTTVGGALSGAGVGVQDIDYVLGIAKAYATRVGGGPFPTELDDKIGQGIRDRGVEYGASTGRPRRCGWMDIVALKRAV AINGITGLCITKLDVLDGMDKLKICIAYEYHDKRSEYAPLDAQGWEECTPVYLEFPGWNESTHGITSWEKLPPAARAYLC ALEELAGCPIGIVSTGPDREHTIMLHDPFA >Mature_429_residues GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINAKKTVLHLIPSGILRNGVLCLIGNGVVISPAALR KEIEELEDTGLEIRSRLKISPAAPLIMEYHIALDQAREKAAGGRAIGTTGRGIGPAYEDKVGRRGIRVADLHYPDQLAEK LRAALDYHNFVLTRYFGVDGMDFQRIYDEMLVFAEYVEPMKSDVAGILHDLRKQGKRVLFEGAQGTLLDIDHGTYPYVTS SSTTVGGALSGAGVGVQDIDYVLGIAKAYATRVGGGPFPTELDDKIGQGIRDRGVEYGASTGRPRRCGWMDIVALKRAVA INGITGLCITKLDVLDGMDKLKICIAYEYHDKRSEYAPLDAQGWEECTPVYLEFPGWNESTHGITSWEKLPPAARAYLCA LEELAGCPIGIVSTGPDREHTIMLHDPFA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family
Homologues:
Organism=Homo sapiens, GI22748717, Length=427, Percent_Identity=41.92037470726, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI34577063, Length=430, Percent_Identity=41.6279069767442, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=40.0503778337531, Blast_Score=285, Evalue=6e-77, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=59.5348837209302, Blast_Score=534, Evalue=1e-153, Organism=Caenorhabditis elegans, GI25146553, Length=431, Percent_Identity=42.4593967517401, Blast_Score=329, Evalue=2e-90, Organism=Caenorhabditis elegans, GI25146555, Length=431, Percent_Identity=42.4593967517401, Blast_Score=328, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=43.1235431235431, Blast_Score=331, Evalue=1e-91, Organism=Drosophila melanogaster, GI21356033, Length=424, Percent_Identity=41.7452830188679, Blast_Score=324, Evalue=8e-89,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): PURA_XYLF2 (B2I7V8)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830397.1 - ProteinModelPortal: B2I7V8 - SMR: B2I7V8 - GeneID: 6202889 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1719 - HOGENOM: HBG658237 - OMA: YVLGIIK - ProtClustDB: PRK01117 - GO: GO:0005737 - HAMAP: MF_00011 - InterPro: IPR018220 - InterPro: IPR001114 - PANTHER: PTHR11846 - SMART: SM00788 - TIGRFAMs: TIGR00184
Pfam domain/function: PF00709 Adenylsucc_synt
EC number: =6.3.4.4
Molecular weight: Translated: 46641; Mature: 46510
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: ACT_SITE 14-14 ACT_SITE 42-42 BINDING 130-130 BINDING 144-144 BINDING 225-225 BINDING 240-240 BINDING 304-304 BINDING 306-306
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINAKKTVLHLIPSGI CCCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEEECHHHHHHHHHHHH LRNGVLCLIGNGVVISPAALRKEIEELEDTGLEIRSRLKISPAAPLIMEYHIALDQAREK HHCCEEEEECCCEEECHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHH AAGGRAIGTTGRGIGPAYEDKVGRRGIRVADLHYPDQLAEKLRAALDYHNFVLTRYFGVD HCCCCEECCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEHEECCC GMDFQRIYDEMLVFAEYVEPMKSDVAGILHDLRKQGKRVLFEGAQGTLLDIDHGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEE SSSTTVGGALSGAGVGVQDIDYVLGIAKAYATRVGGGPFPTELDDKIGQGIRDRGVEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGITGLCITKLDVLDGMDKLKICIAYEYHDKRSEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWNESTHGITSWEKLPPAARAYLCALEELAGCPIGIVSTGPDRE CCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCC HTIMLHDPFA CEEEEECCCC >Mature Secondary Structure GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINAKKTVLHLIPSGI CCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEEECHHHHHHHHHHHH LRNGVLCLIGNGVVISPAALRKEIEELEDTGLEIRSRLKISPAAPLIMEYHIALDQAREK HHCCEEEEECCCEEECHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHH AAGGRAIGTTGRGIGPAYEDKVGRRGIRVADLHYPDQLAEKLRAALDYHNFVLTRYFGVD HCCCCEECCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEHEECCC GMDFQRIYDEMLVFAEYVEPMKSDVAGILHDLRKQGKRVLFEGAQGTLLDIDHGTYPYVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEEE SSSTTVGGALSGAGVGVQDIDYVLGIAKAYATRVGGGPFPTELDDKIGQGIRDRGVEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGITGLCITKLDVLDGMDKLKICIAYEYHDKRSEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWNESTHGITSWEKLPPAARAYLCALEELAGCPIGIVSTGPDRE CCCCCCCCCCEEEECCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCC HTIMLHDPFA CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA