Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682224
Identifier: 182682224
GI number: 182682224
Start: 1883757
End: 1884239
Strand: Reverse
Name: 182682224
Synonym: XfasM23_1706
Alternate gene names: NA
Gene position: 1884239-1883757 (Counterclockwise)
Preceding gene: 182682225
Following gene: 182682223
Centisome position: 74.31
GC content: 51.35
Gene sequence:
>483_bases ATGAAAAAGTGTTCCAATCATCGTTGCCATTGGGCTGCGCCTCCCCTTGGGGTGTCGTTGATTGAGGTGTTGATCGCGTT GCTGGTTCTGGGTATCGGTTTGTTGGCTTTCGCACTGCTTCAAACCATGAATGTGCGTTTCACTAAAAGTGCCCAGCAGC GAACGATCGCCAGTAACTTAGCTTACGAGTTGCTAGACATCATGCGTAGCCAGCGCAGTACGGTGGGTTACTACGGTGCG ATCACTTATGGAAGTTTTGATGGTGTTGATGGCACCGACTGCAATCATTCTGAAAATGCTACGCCGGTTGCCAACATGGC GCGTTGGCGTTGTGAGGTGGTGAGTGCACTGCCGGATGGCCGTGCACAGGTGAATCTTGCGACGAATGGGGAAGTGACGG TGACGATCCGTTGGGGTGATCAACACTGGGAGACCGATGTGAATAAGCAATCCACCACTTTCAATCTGACTAGTGTGTTA TGA
Upstream 100 bases:
>100_bases TGGTGACGCTCCGTCCGGATAACTGCGGCGGCCAGCCATTACAGCGTACCGTCACGATCACCGCTACGGGTCTGGCGAAG GTGGAGAAGGGCGCGTGTCA
Downstream 100 bases:
>100_bases CGATGTATTCCTCACGCTTAGCGCGTCTTCGCATCAGTGGACTTTCGTTGATGGAACTGCTGATCGCACTGTTGATTGGT TCCATACTCATTGTGGGGGT
Product: type IV pilus modification protein PilV
Products: NA
Alternate protein names: Type IV Pilus Protein PilV; Type 4 Fimbrial Biogenesis Protein PilV; Type IV Pilus Assembly Protein PilV
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKCSNHRCHWAAPPLGVSLIEVLIALLVLGIGLLAFALLQTMNVRFTKSAQQRTIASNLAYELLDIMRSQRSTVGYYGA ITYGSFDGVDGTDCNHSENATPVANMARWRCEVVSALPDGRAQVNLATNGEVTVTIRWGDQHWETDVNKQSTTFNLTSVL
Sequences:
>Translated_160_residues MKKCSNHRCHWAAPPLGVSLIEVLIALLVLGIGLLAFALLQTMNVRFTKSAQQRTIASNLAYELLDIMRSQRSTVGYYGA ITYGSFDGVDGTDCNHSENATPVANMARWRCEVVSALPDGRAQVNLATNGEVTVTIRWGDQHWETDVNKQSTTFNLTSVL >Mature_160_residues MKKCSNHRCHWAAPPLGVSLIEVLIALLVLGIGLLAFALLQTMNVRFTKSAQQRTIASNLAYELLDIMRSQRSTVGYYGA ITYGSFDGVDGTDCNHSENATPVANMARWRCEVVSALPDGRAQVNLATNGEVTVTIRWGDQHWETDVNKQSTTFNLTSVL
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17586; Mature: 17586
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCSNHRCHWAAPPLGVSLIEVLIALLVLGIGLLAFALLQTMNVRFTKSAQQRTIASNL CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AYELLDIMRSQRSTVGYYGAITYGSFDGVDGTDCNHSENATPVANMARWRCEVVSALPDG HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RAQVNLATNGEVTVTIRWGDQHWETDVNKQSTTFNLTSVL CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MKKCSNHRCHWAAPPLGVSLIEVLIALLVLGIGLLAFALLQTMNVRFTKSAQQRTIASNL CCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AYELLDIMRSQRSTVGYYGAITYGSFDGVDGTDCNHSENATPVANMARWRCEVVSALPDG HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC RAQVNLATNGEVTVTIRWGDQHWETDVNKQSTTFNLTSVL CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA