Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682207
Identifier: 182682207
GI number: 182682207
Start: 1863598
End: 1864113
Strand: Reverse
Name: 182682207
Synonym: XfasM23_1686
Alternate gene names: NA
Gene position: 1864113-1863598 (Counterclockwise)
Preceding gene: 182682208
Following gene: 182682206
Centisome position: 73.52
GC content: 65.7
Gene sequence:
>516_bases ATGACCACCGCATCCCCGCGCCTGCACCGCCTCGTTGCCGCCTTCGACCGCGGCCTCCTCCAGCTTGCCCCAGCCTGGGC TGCCTCCCGTGCCCAGAGCCGCGTCAAAGCCGTTGCCTACCGACAGGCCTATGAAGCGGCGGAAAAAACCCACCTGCGCC AAGCCTCCCGCGACTTTGGCAGCGGCAACACCATCGTGACCATGACCGGCGTGGCCCTGCGCAACCAAGCACGCCACCTG GACCGCAACCACGACATCATCAGCGGCGGCCTATCCACCTTAGTCCAGAACATCATCGGCCCCAGCGGCATCAACATCGT CCCCACCCCCCGCGACGTCGACGGCAACCTGGTTGAATCACTGGTGGATGCCATCCTCCCCCTCTACCACGCCTGGTCCA AACGTCCCGAAGTCACCTGGATGCACGACTGGCCCAGCGTCCAGCGCCGAACTGGACCGCTGGAAATACGCCGCAGGCCA CGAAGTGCGTGGCCTGGTGTTGCGCCGTGTCGATGA
Upstream 100 bases:
>100_bases AATGGCTGCGCCGCGCCGCCGCAGAAGCGGCCCCCTCCACGAGCGGCACCGTTCGCATTGCCATTGCCGACTTCCGCAGA GACAGCGGCGCAGACGCACC
Downstream 100 bases:
>100_bases ACGCGCCCTGTGCGAAGGAAGGGCCTCGTGATGACCTTTCCCCCCTTCTTGCTCATCGTTGCATTACTGCTGTGGATCAG CCGCCGCAGCAGTCACTCAC
Product: bacteriophage capsid protein-like protein
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Bacteriophage Capsid Protein; Portal Protein Putative Prophage; Head-Tail Preconnector Protein Phage Origin; Gifsy-2 Prophage VmtV; Phage Portal Protein Lambda Family Protein; Phage Portal Protein Lambda; Portal Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTTASPRLHRLVAAFDRGLLQLAPAWAASRAQSRVKAVAYRQAYEAAEKTHLRQASRDFGSGNTIVTMTGVALRNQARHL DRNHDIISGGLSTLVQNIIGPSGINIVPTPRDVDGNLVESLVDAILPLYHAWSKRPEVTWMHDWPSVQRRTGPLEIRRRP RSAWPGVAPCR
Sequences:
>Translated_171_residues MTTASPRLHRLVAAFDRGLLQLAPAWAASRAQSRVKAVAYRQAYEAAEKTHLRQASRDFGSGNTIVTMTGVALRNQARHL DRNHDIISGGLSTLVQNIIGPSGINIVPTPRDVDGNLVESLVDAILPLYHAWSKRPEVTWMHDWPSVQRRTGPLEIRRRP RSAWPGVAPCR >Mature_170_residues TTASPRLHRLVAAFDRGLLQLAPAWAASRAQSRVKAVAYRQAYEAAEKTHLRQASRDFGSGNTIVTMTGVALRNQARHLD RNHDIISGGLSTLVQNIIGPSGINIVPTPRDVDGNLVESLVDAILPLYHAWSKRPEVTWMHDWPSVQRRTGPLEIRRRPR SAWPGVAPCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18984; Mature: 18853
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASPRLHRLVAAFDRGLLQLAPAWAASRAQSRVKAVAYRQAYEAAEKTHLRQASRDFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGNTIVTMTGVALRNQARHLDRNHDIISGGLSTLVQNIIGPSGINIVPTPRDVDGNLVES CCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHH LVDAILPLYHAWSKRPEVTWMHDWPSVQRRTGPLEIRRRPRSAWPGVAPCR HHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TTASPRLHRLVAAFDRGLLQLAPAWAASRAQSRVKAVAYRQAYEAAEKTHLRQASRDFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGNTIVTMTGVALRNQARHLDRNHDIISGGLSTLVQNIIGPSGINIVPTPRDVDGNLVES CCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHH LVDAILPLYHAWSKRPEVTWMHDWPSVQRRTGPLEIRRRPRSAWPGVAPCR HHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA