| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is aceE
Identifier: 182682112
GI number: 182682112
Start: 1761774
End: 1764464
Strand: Direct
Name: aceE
Synonym: XfasM23_1590
Alternate gene names: 182682112
Gene position: 1761774-1764464 (Clockwise)
Preceding gene: 182682103
Following gene: 182682125
Centisome position: 69.48
GC content: 55.67
Gene sequence:
>2691_bases ATGAACCGGTTGAAAGAAGCACTGCACAACGATCCAAACCCGCTAGAAACCCAGGAATGGCTCGAATCGATCAAGGCCGT CATCGACATCGCCGGTCCCGAACGTGCACACCAATTACTGGAAGGAGTCGCCGAACAGATTCACCGTACTGGCACCAACC TACCCTTCTCCCCCATCACCGAATACGTCAACACAATTCCCACAGCCGACGAAGCCAAAAACCCCGGCGACCCCGCATTA GAACGCAGCATCCGCTCCATCATCCGTTGGAATGCGATGGCGACCGTCGTACGCGCCAATCGCAAGCCTGGCGACCTCGG CGGCCACATCGCCTCCTTCGCATCTTCAGCCACACTCTACGACGTCGGATTCAACCACTTCTGGCGCGCACCCAGCCCCC AACATCCTGGCGACCTGTTATACATCCAAGGTCATAGCTCCCCGGGCATCTATGCACGCGCCTTCCTCGAAGGCCGGATC AGCGAAAGCCAACTCGACCACTTCCGTATGGAAGTCGATGGCAAAGGCATCTCCTCTTACCCCCACCCCTGGCTGATGCC GCAATTCTGGCAGACACCCACCGTATCAATGGGCCTGGGTCCACTGAGTGCCATCTACCAAGCCCAATTCATGAAATACC TGGAACACCGCGGCCTGATCGCCCCATCCGACCGCAAAGTATGGTGCTTCATCGGCGATGGCGAAAGCGATGAACCAGAA ACATTAGGCGCCATTGCACTCGCCGGCCGCGAAGGCTTAGACAACTTGATCTTTGTAGTCAATTGCAACCTGCAACGGCT AGATGGCCCTGTCCGTGGCAACGGCAAAATTATCCAAGAACTGGAAGGCGTCTTCCGCGGCGGTGGCTGGAATGTCATCA AACTACTGTGGGGAGCGCACTGGGACCCACTCCTGGCCCAAGACACCCAAGGCGTGCTGCGCAAACTGATGATGGAAACC GTCGATGGCGAATACCAAAACTGCAAAGCATTCGGTGGCGAATACACCCGTAAACACTTCTTCGATAAGTACCCAGAAAC GGCTGCGATGGTCGCCCACCTATCCGATAACGACATCTGGCGCCTCAACCGTGGCGGCCACGACCCACACAAGATTTATG CTGCCTACCATCGCGCGGTCAACACCCAAGGCATGCCTACCGTCATCCTAGCCAAGACCGTCAAAGGCTACGGCATGGGG ACCGCCGGCGAATCACTGAACCCCACACATCAAACCAAAAAGCTGGACCACGACGCAATCAAACACTTCCGTGACCGATT CAACATCCCAATCAGCGACCAACAATTGGACGCAGCGGATCAAATTCCGTTCTACCACCCTGGCCCGGATTCGCCGGAAA TAAAGTACATGCTTGCCCGCCGTGAAGCCTTGGGCGGCTTCCTCCCGCAACGTCGCACCAAATCCAGCAAATCATTCATC GTCCCTGGCCTAGACAAGTACGAACGCCTCCTCACCTCAAGCGGCGAACGCACCTACTCTACAACCATGGCGTTTGTACA AAGCCTCAACATCACCCTACGCGACAAAGCACTCGGTCCCCACATCGTACCGATCGTCGCCGACGAAGCACGCACCTTCG GTATGGAAGGCCTCTTCCGCCAGATCGGCATCTATGCCCCATTCGGCCAAAAATACAAACCAGTCGACGCCGATCAATTG ATGTACTACCGCGAAGATGAATCCGGCCAAGTACTGCAACAAGGCATCACCGAACCTGGAGCAATCGCCTCATGGATGGC TGCCGGCACCAGCTACTCCGTGTCTGATGTCCCCATGCTGCCGTTTTACATCTACTACTCCATGTTTGGCTTCCAACGCA TCGGCGATATCGCCTGGCAAGCCGCAGACATGCGCACCCGCGGCTTCCTACTTGGAGGCACTGCTGGCCGCACCACATTG AACGGCGAAGGCCTACAACACGAAGATGGCCACAGCCATCTGATGGCCGGTGCAATCCCCAACGTACGCAGCTACGACCC CACCTTTGGTTACGAAGTCACCGTGATCCTGCAACATGGCATGAAAGCAATGATGCAAGACCAAATCGACGAGTACTACT ACCTAACCTTGATGAACGAAAACTACGCCCATCCGGACATGCCAGCCGGCGCAGAACAAGGCATCATCAAAGGCATGTAC CTGCTCAAAGACGCCGGAAAACCAAAAAAAGGCGAACTGCGCGTGCAATTACTGGGTTCAGGCACCATCTTGCGCGAAGC TATTGCTGCTGCCGAATTACTCCATCAAGATTTTGGTATCACTGCCGATATCTGGTCCTGCCCCAGCTTTAGCGAATTAC GCAAAGATGGCTTTGATGCAGAACGATGGAACCGCCTCCATCCAGACAACCAACCGCGTACACCCTACGTCACCCAACAA CTGGAAAACCGTCAGGGACCGGCCATTGCCGCAACAGATTACGTACGTCTGTTCGCCGACCAAATCCGTGCTTTTGTACC GATGCACTACACCGTCCTTGGCACCGATGGCTTCGGGCGCAGCGATACCCGCAGCAACCTGCGCCGCTTCTTCGAAGTGG ACCGCTACTTTATCGCCCACGCCGCGATTGCCGCATTAGCCAAAGAAGGCAAAATGACCGGGAAAGACGTTGCACGTGCC ATTGAGCAATACAACATCAATCCGGAGAAACTAAACCCAGTAGACACCTGA
Upstream 100 bases:
>100_bases GCGATGTAGCCAGGAATGCAATTGAACCAGTGCGTTACACTTACGCATCCAAACATATTTAACGCTTAGCGCATGCGCGC GCGAAGCCCTGGGAATACTA
Downstream 100 bases:
>100_bases GGTCTTGCCAAAGTAAACACCCTCAACCGTGCTGGATTGAACCACATCACCACCCACCCCTAACATCCTGTGAAACGTTG CAGAAAACTCACAATGATGA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 896; Mature: 896
Protein sequence:
>896_residues MNRLKEALHNDPNPLETQEWLESIKAVIDIAGPERAHQLLEGVAEQIHRTGTNLPFSPITEYVNTIPTADEAKNPGDPAL ERSIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLYDVGFNHFWRAPSPQHPGDLLYIQGHSSPGIYARAFLEGRI SESQLDHFRMEVDGKGISSYPHPWLMPQFWQTPTVSMGLGPLSAIYQAQFMKYLEHRGLIAPSDRKVWCFIGDGESDEPE TLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGAHWDPLLAQDTQGVLRKLMMET VDGEYQNCKAFGGEYTRKHFFDKYPETAAMVAHLSDNDIWRLNRGGHDPHKIYAAYHRAVNTQGMPTVILAKTVKGYGMG TAGESLNPTHQTKKLDHDAIKHFRDRFNIPISDQQLDAADQIPFYHPGPDSPEIKYMLARREALGGFLPQRRTKSSKSFI VPGLDKYERLLTSSGERTYSTTMAFVQSLNITLRDKALGPHIVPIVADEARTFGMEGLFRQIGIYAPFGQKYKPVDADQL MYYREDESGQVLQQGITEPGAIASWMAAGTSYSVSDVPMLPFYIYYSMFGFQRIGDIAWQAADMRTRGFLLGGTAGRTTL NGEGLQHEDGHSHLMAGAIPNVRSYDPTFGYEVTVILQHGMKAMMQDQIDEYYYLTLMNENYAHPDMPAGAEQGIIKGMY LLKDAGKPKKGELRVQLLGSGTILREAIAAAELLHQDFGITADIWSCPSFSELRKDGFDAERWNRLHPDNQPRTPYVTQQ LENRQGPAIAATDYVRLFADQIRAFVPMHYTVLGTDGFGRSDTRSNLRRFFEVDRYFIAHAAIAALAKEGKMTGKDVARA IEQYNINPEKLNPVDT
Sequences:
>Translated_896_residues MNRLKEALHNDPNPLETQEWLESIKAVIDIAGPERAHQLLEGVAEQIHRTGTNLPFSPITEYVNTIPTADEAKNPGDPAL ERSIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLYDVGFNHFWRAPSPQHPGDLLYIQGHSSPGIYARAFLEGRI SESQLDHFRMEVDGKGISSYPHPWLMPQFWQTPTVSMGLGPLSAIYQAQFMKYLEHRGLIAPSDRKVWCFIGDGESDEPE TLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGAHWDPLLAQDTQGVLRKLMMET VDGEYQNCKAFGGEYTRKHFFDKYPETAAMVAHLSDNDIWRLNRGGHDPHKIYAAYHRAVNTQGMPTVILAKTVKGYGMG TAGESLNPTHQTKKLDHDAIKHFRDRFNIPISDQQLDAADQIPFYHPGPDSPEIKYMLARREALGGFLPQRRTKSSKSFI VPGLDKYERLLTSSGERTYSTTMAFVQSLNITLRDKALGPHIVPIVADEARTFGMEGLFRQIGIYAPFGQKYKPVDADQL MYYREDESGQVLQQGITEPGAIASWMAAGTSYSVSDVPMLPFYIYYSMFGFQRIGDIAWQAADMRTRGFLLGGTAGRTTL NGEGLQHEDGHSHLMAGAIPNVRSYDPTFGYEVTVILQHGMKAMMQDQIDEYYYLTLMNENYAHPDMPAGAEQGIIKGMY LLKDAGKPKKGELRVQLLGSGTILREAIAAAELLHQDFGITADIWSCPSFSELRKDGFDAERWNRLHPDNQPRTPYVTQQ LENRQGPAIAATDYVRLFADQIRAFVPMHYTVLGTDGFGRSDTRSNLRRFFEVDRYFIAHAAIAALAKEGKMTGKDVARA IEQYNINPEKLNPVDT >Mature_896_residues MNRLKEALHNDPNPLETQEWLESIKAVIDIAGPERAHQLLEGVAEQIHRTGTNLPFSPITEYVNTIPTADEAKNPGDPAL ERSIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLYDVGFNHFWRAPSPQHPGDLLYIQGHSSPGIYARAFLEGRI SESQLDHFRMEVDGKGISSYPHPWLMPQFWQTPTVSMGLGPLSAIYQAQFMKYLEHRGLIAPSDRKVWCFIGDGESDEPE TLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGAHWDPLLAQDTQGVLRKLMMET VDGEYQNCKAFGGEYTRKHFFDKYPETAAMVAHLSDNDIWRLNRGGHDPHKIYAAYHRAVNTQGMPTVILAKTVKGYGMG TAGESLNPTHQTKKLDHDAIKHFRDRFNIPISDQQLDAADQIPFYHPGPDSPEIKYMLARREALGGFLPQRRTKSSKSFI VPGLDKYERLLTSSGERTYSTTMAFVQSLNITLRDKALGPHIVPIVADEARTFGMEGLFRQIGIYAPFGQKYKPVDADQL MYYREDESGQVLQQGITEPGAIASWMAAGTSYSVSDVPMLPFYIYYSMFGFQRIGDIAWQAADMRTRGFLLGGTAGRTTL NGEGLQHEDGHSHLMAGAIPNVRSYDPTFGYEVTVILQHGMKAMMQDQIDEYYYLTLMNENYAHPDMPAGAEQGIIKGMY LLKDAGKPKKGELRVQLLGSGTILREAIAAAELLHQDFGITADIWSCPSFSELRKDGFDAERWNRLHPDNQPRTPYVTQQ LENRQGPAIAATDYVRLFADQIRAFVPMHYTVLGTDGFGRSDTRSNLRRFFEVDRYFIAHAAIAALAKEGKMTGKDVARA IEQYNINPEKLNPVDT
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=893, Percent_Identity=56.5509518477044, Blast_Score=1055, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100216; Mature: 100216
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLKEALHNDPNPLETQEWLESIKAVIDIAGPERAHQLLEGVAEQIHRTGTNLPFSPIT CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH EYVNTIPTADEAKNPGDPALERSIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLY HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEE DVGFNHFWRAPSPQHPGDLLYIQGHSSPGIYARAFLEGRISESQLDHFRMEVDGKGISSY ECCHHHHCCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCCCHHHHHHEEEEECCCCCCCC PHPWLMPQFWQTPTVSMGLGPLSAIYQAQFMKYLEHRGLIAPSDRKVWCFIGDGESDEPE CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCH TLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGAH HHHHEEECCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC WDPLLAQDTQGVLRKLMMETVDGEYQNCKAFGGEYTRKHFFDKYPETAAMVAHLSDNDIW CCCHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCHHHHEEECCCCCEE RLNRGGHDPHKIYAAYHRAVNTQGMPTVILAKTVKGYGMGTAGESLNPTHQTKKLDHDAI EECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHCCHHHH KHFRDRFNIPISDQQLDAADQIPFYHPGPDSPEIKYMLARREALGGFLPQRRTKSSKSFI HHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEE VPGLDKYERLLTSSGERTYSTTMAFVQSLNITLRDKALGPHIVPIVADEARTFGMEGLFR CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCHHHHCHHHHHH QIGIYAPFGQKYKPVDADQLMYYREDESGQVLQQGITEPGAIASWMAAGTSYSVSDVPML HHCCCCCCCCCCCCCCHHHEEEEEECCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH PFYIYYSMFGFQRIGDIAWQAADMRTRGFLLGGTAGRTTLNGEGLQHEDGHSHLMAGAIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEECCCC NVRSYDPTFGYEVTVILQHGMKAMMQDQIDEYYYLTLMNENYAHPDMPAGAEQGIIKGMY CCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH LLKDAGKPKKGELRVQLLGSGTILREAIAAAELLHQDFGITADIWSCPSFSELRKDGFDA HHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH ERWNRLHPDNQPRTPYVTQQLENRQGPAIAATDYVRLFADQIRAFVPMHYTVLGTDGFGR HHHCCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCEEEEEEECCCCCC SDTRSNLRRFFEVDRYFIAHAAIAALAKEGKMTGKDVARAIEQYNINPEKLNPVDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure MNRLKEALHNDPNPLETQEWLESIKAVIDIAGPERAHQLLEGVAEQIHRTGTNLPFSPIT CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH EYVNTIPTADEAKNPGDPALERSIRSIIRWNAMATVVRANRKPGDLGGHIASFASSATLY HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEE DVGFNHFWRAPSPQHPGDLLYIQGHSSPGIYARAFLEGRISESQLDHFRMEVDGKGISSY ECCHHHHCCCCCCCCCCCEEEEEECCCCCCEEHHHHHCCCCHHHHHHEEEEECCCCCCCC PHPWLMPQFWQTPTVSMGLGPLSAIYQAQFMKYLEHRGLIAPSDRKVWCFIGDGESDEPE CCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCH TLGAIALAGREGLDNLIFVVNCNLQRLDGPVRGNGKIIQELEGVFRGGGWNVIKLLWGAH HHHHEEECCCCCCCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC WDPLLAQDTQGVLRKLMMETVDGEYQNCKAFGGEYTRKHFFDKYPETAAMVAHLSDNDIW CCCHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCHHHHEEECCCCCEE RLNRGGHDPHKIYAAYHRAVNTQGMPTVILAKTVKGYGMGTAGESLNPTHQTKKLDHDAI EECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCHHHHHCCHHHH KHFRDRFNIPISDQQLDAADQIPFYHPGPDSPEIKYMLARREALGGFLPQRRTKSSKSFI HHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEE VPGLDKYERLLTSSGERTYSTTMAFVQSLNITLRDKALGPHIVPIVADEARTFGMEGLFR CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEEEEECCHHHHCHHHHHH QIGIYAPFGQKYKPVDADQLMYYREDESGQVLQQGITEPGAIASWMAAGTSYSVSDVPML HHCCCCCCCCCCCCCCHHHEEEEEECCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH PFYIYYSMFGFQRIGDIAWQAADMRTRGFLLGGTAGRTTLNGEGLQHEDGHSHLMAGAIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEECCCC NVRSYDPTFGYEVTVILQHGMKAMMQDQIDEYYYLTLMNENYAHPDMPAGAEQGIIKGMY CCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHH LLKDAGKPKKGELRVQLLGSGTILREAIAAAELLHQDFGITADIWSCPSFSELRKDGFDA HHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCH ERWNRLHPDNQPRTPYVTQQLENRQGPAIAATDYVRLFADQIRAFVPMHYTVLGTDGFGR HHHCCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCEEEEEEECCCCCC SDTRSNLRRFFEVDRYFIAHAAIAALAKEGKMTGKDVARAIEQYNINPEKLNPVDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9171401; 10984043 [H]