Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is acpP
Identifier: 182682109
GI number: 182682109
Start: 1759066
End: 1759305
Strand: Reverse
Name: acpP
Synonym: XfasM23_1587
Alternate gene names: 182682109
Gene position: 1759305-1759066 (Counterclockwise)
Preceding gene: 182682110
Following gene: 182682108
Centisome position: 69.38
GC content: 47.08
Gene sequence:
>240_bases ATGAGTGACATCGAAGCGCGCGTCAGAAAAATTGTCGCCGAGAAACTCAATGTCGATGAAGAAAAAGTAACTAATACCTC GACGTTCGTCGATGAACTGGGTGCGGATTCGTTGGATACCGTCGAGTTGGTGATGGCCTTGGAAGACGAGTTCCAATGTG AGATCGGTGACGAGGCTGCTGAGAAGATGACTTCGGTGCAACATGCTATCGACTACATTAAGAGTAATGCTAAGTGCTAA
Upstream 100 bases:
>100_bases TGGTTTCGCTGCTTCCATTACACTATCGAACATGGCCCATCGTGGTTTGATGGCTTTATGAAACGTCTTAATTTATAGAT TTTTGCGGAGTGATAAGCCA
Downstream 100 bases:
>100_bases TCCGCTGTTTCGGTGCTGACAACGCGTGCGTTGTGTCTGCGTCATCTGCATGGGGCCGCTGCTGCGGCCCTGTTTTTATT ACAACGCTTGTAAATAAGTA
Product: acyl carrier protein
Products: NA
Alternate protein names: ACP
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSDIEARVRKIVAEKLNVDEEKVTNTSTFVDELGADSLDTVELVMALEDEFQCEIGDEAAEKMTSVQHAIDYIKSNAKC
Sequences:
>Translated_79_residues MSDIEARVRKIVAEKLNVDEEKVTNTSTFVDELGADSLDTVELVMALEDEFQCEIGDEAAEKMTSVQHAIDYIKSNAKC >Mature_78_residues SDIEARVRKIVAEKLNVDEEKVTNTSTFVDELGADSLDTVELVMALEDEFQCEIGDEAAEKMTSVQHAIDYIKSNAKC
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
Organism=Escherichia coli, GI1787336, Length=76, Percent_Identity=65.7894736842105, Blast_Score=101, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACP_XYLF2 (B2I798)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830269.1 - ProteinModelPortal: B2I798 - SMR: B2I798 - GeneID: 6202699 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1587 - HOGENOM: HBG755218 - OMA: IDYVNSH - ProtClustDB: PRK00982 - GO: GO:0005737 - HAMAP: MF_01217 - InterPro: IPR003231 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10 - TIGRFAMs: TIGR00517
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 8782; Mature: 8651
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIEARVRKIVAEKLNVDEEKVTNTSTFVDELGADSLDTVELVMALEDEFQCEIGDEAA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH EKMTSVQHAIDYIKSNAKC HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDIEARVRKIVAEKLNVDEEKVTNTSTFVDELGADSLDTVELVMALEDEFQCEIGDEAA CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH EKMTSVQHAIDYIKSNAKC HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA