Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682093
Identifier: 182682093
GI number: 182682093
Start: 1744602
End: 1745072
Strand: Reverse
Name: 182682093
Synonym: XfasM23_1571
Alternate gene names: NA
Gene position: 1745072-1744602 (Counterclockwise)
Preceding gene: 182682094
Following gene: 182682092
Centisome position: 68.82
GC content: 56.48
Gene sequence:
>471_bases ATGCTCGTTCCTGACCTGTGCCCCACACGGCGGACGATACGGACGCAAGGGCTGCCGAATCCCGTATCAAGCCAGCTATT TTCTACTACCTACCTACCTACCTACCTACCTGCCTACCTGCCTACCTGCCTGGATGGATGGATGGATGGATGGATGGATT CAGTTCCAAACCCGCGCAATGACCCCATCCGTTGCACTGGCAGCCCCCAGAATCACACTAACCGACCAGTCATCGGTGGC CATATTAAGCATCGGCGCCCTCCGATGTTGTTTGTCGCCAGTAACGCCCAACGTCAACAGGCCCCCTTCACCAGTGATGA TCCGCTGCCGTTTTCTCCCCAGTGTTCGGCAATCGCTCAGCTTCAGTCCGGTGTACTAGTTTGCTGGAGGATATGCCTCG GGACACATCCACTATTGCCATCATTGCACTCCAGTCGATGTCCCCGACGTAGCACAGCCAGCAACCCCTGA
Upstream 100 bases:
>100_bases GCGTGAAGTGCTGGGGCAGCGCGGCGCCCCATCGCCATTACGGCAACTCTGGCAGTGCTGGCGTGCTGCCAGCGGTGGAG ACTGAAAGGGGAGCGTAGCA
Downstream 100 bases:
>100_bases TGCTGGTCAGGCTATACCCCTGCGTCCTTGCCTAACAGCTCAGAGCACCGCCGGTTGCTGGTTAGCCCTTCTGGTCATGC TGATACAAACATCGCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLVPDLCPTRRTIRTQGLPNPVSSQLFSTTYLPTYLPAYLPTCLDGWMDGWMDSVPNPRNDPIRCTGSPQNHTNRPVIGG HIKHRRPPMLFVASNAQRQQAPFTSDDPLPFSPQCSAIAQLQSGVLVCWRICLGTHPLLPSLHSSRCPRRSTASNP
Sequences:
>Translated_156_residues MLVPDLCPTRRTIRTQGLPNPVSSQLFSTTYLPTYLPAYLPTCLDGWMDGWMDSVPNPRNDPIRCTGSPQNHTNRPVIGG HIKHRRPPMLFVASNAQRQQAPFTSDDPLPFSPQCSAIAQLQSGVLVCWRICLGTHPLLPSLHSSRCPRRSTASNP >Mature_156_residues MLVPDLCPTRRTIRTQGLPNPVSSQLFSTTYLPTYLPAYLPTCLDGWMDGWMDSVPNPRNDPIRCTGSPQNHTNRPVIGG HIKHRRPPMLFVASNAQRQQAPFTSDDPLPFSPQCSAIAQLQSGVLVCWRICLGTHPLLPSLHSSRCPRRSTASNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17297; Mature: 17297
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPDLCPTRRTIRTQGLPNPVSSQLFSTTYLPTYLPAYLPTCLDGWMDGWMDSVPNPRN CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPIRCTGSPQNHTNRPVIGGHIKHRRPPMLFVASNAQRQQAPFTSDDPLPFSPQCSAIAQ CCEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCHHHHHH LQSGVLVCWRICLGTHPLLPSLHSSRCPRRSTASNP HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MLVPDLCPTRRTIRTQGLPNPVSSQLFSTTYLPTYLPAYLPTCLDGWMDGWMDSVPNPRN CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPIRCTGSPQNHTNRPVIGGHIKHRRPPMLFVASNAQRQQAPFTSDDPLPFSPQCSAIAQ CCEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCCHHHHHH LQSGVLVCWRICLGTHPLLPSLHSSRCPRRSTASNP HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA