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The map label for this gene is araQ [H]

Identifier: 182682070

GI number: 182682070

Start: 1721844

End: 1722680

Strand: Reverse

Name: araQ [H]

Synonym: XfasM23_1548

Alternate gene names: 182682070

Gene position: 1722680-1721844 (Counterclockwise)

Preceding gene: 182682071

Following gene: 182682069

Centisome position: 67.94

GC content: 49.94

Gene sequence:

>837_bases
ATGAGTCGTGAGGTCGGGCGCACGAAGTGGAATATTGTGTTTGTCAATGGGTGCTTATTTATGTTTGCGTTGGTGAGTCT
GGCGCCCTTGCTTTGGATGGTGTCTGCATCATTGATGCCAGCGGGTGAGGCCAGTCGCTTTCCGCCGCCATTTTTTCCTT
CTGTGGTGACGTTCGCGAATTACCGTGAGTTGTTTGCGCGCGTTGGTATGGGGCGTTATTTCGTTAACAGTTTGCTGGTG
TCGTTATCGATTACATTTGGTTCAGTGCTTTTTAATACGATGGCTGGTTACGCTTTCGCCAAGTTACGTTTTGTTGGCCG
TGAACGGGTTTTTCAGTTGCTTCTTACGGCGTTAGTGATCCCAGCACAGGTGGCGATGTTGCCGTTATTTTTGTTGATGA
AGCATTTGCATTTGGTCGATAGTTTCGCCGGGGTGATCATGCCAGCATTGGCCACGGTATTTGGCATTTTTTTGGTTCGG
CAGTACGTGCGGGGTATTCCCAATGATCTGATTGAGGCTGCACGCATTGATGGTGCCAGTGAGATGCGGATTTTCTTCCA
GATTGTTCTGCCCATGCTGAAACCGGTACTGGTGACGTTAATAACGTTTACTTTCATGGCGTCTTGGAATGATTTTATGT
GGCCGTTGATTGTGCTCACTGACCAGGCGCACTACACGTTGCCGGTGACGTTGGCTGCGCTCGCGCGCGAACACGTCATG
GATATAGAAATGATGATGGCAGGAGCAGTGGTGACTGTGCTCCCGGTATTGCTGTTGTTCATGCTGTTGCAGCGTTACTA
CATCCAGGGTTTGTTGCTGGGGAGCGTGAAAGGGTGA

Upstream 100 bases:

>100_bases
GGAATCTGGGACGTGCTTCTGCTGTCGCGTTTCTGTTGTTTTTGGTTGTTCTTGGGGTGACGACGTTGATGCTGTGTGCT
GGACGTAGGAAAGATTTGGT

Downstream 100 bases:

>100_bases
AGCGAGTGTTACAAGTCCTCAGCGTGGTTGTGGCGTGTATCTGGATATGCGCTGCCCAGGCTGAGCAGGAGCAGGTTCTC
GATGATTTTGAGAATATTTC

Product: monosaccharide-transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSREVGRTKWNIVFVNGCLFMFALVSLAPLLWMVSASLMPAGEASRFPPPFFPSVVTFANYRELFARVGMGRYFVNSLLV
SLSITFGSVLFNTMAGYAFAKLRFVGRERVFQLLLTALVIPAQVAMLPLFLLMKHLHLVDSFAGVIMPALATVFGIFLVR
QYVRGIPNDLIEAARIDGASEMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALAREHVM
DIEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG

Sequences:

>Translated_278_residues
MSREVGRTKWNIVFVNGCLFMFALVSLAPLLWMVSASLMPAGEASRFPPPFFPSVVTFANYRELFARVGMGRYFVNSLLV
SLSITFGSVLFNTMAGYAFAKLRFVGRERVFQLLLTALVIPAQVAMLPLFLLMKHLHLVDSFAGVIMPALATVFGIFLVR
QYVRGIPNDLIEAARIDGASEMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALAREHVM
DIEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG
>Mature_277_residues
SREVGRTKWNIVFVNGCLFMFALVSLAPLLWMVSASLMPAGEASRFPPPFFPSVVTFANYRELFARVGMGRYFVNSLLVS
LSITFGSVLFNTMAGYAFAKLRFVGRERVFQLLLTALVIPAQVAMLPLFLLMKHLHLVDSFAGVIMPALATVFGIFLVRQ
YVRGIPNDLIEAARIDGASEMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALAREHVMD
IEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=206, Percent_Identity=32.5242718446602, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787571, Length=276, Percent_Identity=30.7971014492754, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31128; Mature: 30997

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREVGRTKWNIVFVNGCLFMFALVSLAPLLWMVSASLMPAGEASRFPPPFFPSVVTFAN
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
YRELFARVGMGRYFVNSLLVSLSITFGSVLFNTMAGYAFAKLRFVGRERVFQLLLTALVI
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAQVAMLPLFLLMKHLHLVDSFAGVIMPALATVFGIFLVRQYVRGIPNDLIEAARIDGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
EMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALAREHVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
DIEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SREVGRTKWNIVFVNGCLFMFALVSLAPLLWMVSASLMPAGEASRFPPPFFPSVVTFAN
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
YRELFARVGMGRYFVNSLLVSLSITFGSVLFNTMAGYAFAKLRFVGRERVFQLLLTALVI
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAQVAMLPLFLLMKHLHLVDSFAGVIMPALATVFGIFLVRQYVRGIPNDLIEAARIDGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
EMRIFFQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAALAREHVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHH
DIEMMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]