| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682035
Identifier: 182682035
GI number: 182682035
Start: 1668487
End: 1669104
Strand: Direct
Name: 182682035
Synonym: XfasM23_1511
Alternate gene names: NA
Gene position: 1668487-1669104 (Clockwise)
Preceding gene: 182682034
Following gene: 182682036
Centisome position: 65.8
GC content: 39.97
Gene sequence:
>618_bases ATGAATATTCCAAGAGTATTTAAATCTCTACTGAAATTATGCGGACTGCTTGCGCTTGCCTTGCTTATGGTATGCGGTGC TATTCTCTCCTGCGGGAGAAATAATATGACAGAAAAAACACCGCAAAAGGCCGCTGCAAAGAACATCAAGGAGGTTAGTA AAATAATGATGCTTCAATCGGATGATCACAGCTACAAAAAATGTTTCAAGTTTCCCCCAGAAGTGTGGCCCAACCAATTT GGACCTAGTATGATGCTATTTCGTTTTAAGACTATTGGGTATCTTTCTGGCATTGAGACATCTCCAGGTAATCTCGGTGA GGCCGGAACCTCGATTGTCTCCTTAGCCTTTTTCCCTGATCAACCATGGAAAAAACATTATATCAACTCCCTTTCACGGG CTTATAGGAATGGGCAAGTTGCAATTATGGGGGAATATAAAGAGTTCTATTTTTATAATCTCAGAGATTTCCTTTATTCA GCGATTGATAAGACGGGATTGCTCAATATTGAATATCAACCTGGCCAACCAAGAAATAAACAGGAGTGGACCTATGAATT ACAGTTAATTATTGATTTTGTTGCAGCCCATACCATCCCATGTCAAGGAGAATCATGA
Upstream 100 bases:
>100_bases CACAACGCCGCGACGCACCGTCTATACGTGCAGTGATGGATCAGGCCGACCACAAAGTTAATAAAATAAAGACACAACAT CATCTTGCGGCGGTTTAATC
Downstream 100 bases:
>100_bases TGACGAATTTAGATTTTTATTTTGATCAGGCGACATTAGATCGTGCTGAGGCTTACAGAAATTCTGGGAATTATCCGGCG ATGTACCAGACATTGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNIPRVFKSLLKLCGLLALALLMVCGAILSCGRNNMTEKTPQKAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPNQF GPSMMLFRFKTIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKKHYINSLSRAYRNGQVAIMGEYKEFYFYNLRDFLYS AIDKTGLLNIEYQPGQPRNKQEWTYELQLIIDFVAAHTIPCQGES
Sequences:
>Translated_205_residues MNIPRVFKSLLKLCGLLALALLMVCGAILSCGRNNMTEKTPQKAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPNQF GPSMMLFRFKTIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKKHYINSLSRAYRNGQVAIMGEYKEFYFYNLRDFLYS AIDKTGLLNIEYQPGQPRNKQEWTYELQLIIDFVAAHTIPCQGES >Mature_205_residues MNIPRVFKSLLKLCGLLALALLMVCGAILSCGRNNMTEKTPQKAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPNQF GPSMMLFRFKTIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKKHYINSLSRAYRNGQVAIMGEYKEFYFYNLRDFLYS AIDKTGLLNIEYQPGQPRNKQEWTYELQLIIDFVAAHTIPCQGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23313; Mature: 23313
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPRVFKSLLKLCGLLALALLMVCGAILSCGRNNMTEKTPQKAAAKNIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPNQFGPSMMLFRFKTIGYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCC QPWKKHYINSLSRAYRNGQVAIMGEYKEFYFYNLRDFLYSAIDKTGLLNIEYQPGQPRNK CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC QEWTYELQLIIDFVAAHTIPCQGES CHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNIPRVFKSLLKLCGLLALALLMVCGAILSCGRNNMTEKTPQKAAAKNIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPNQFGPSMMLFRFKTIGYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCC QPWKKHYINSLSRAYRNGQVAIMGEYKEFYFYNLRDFLYSAIDKTGLLNIEYQPGQPRNK CCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC QEWTYELQLIIDFVAAHTIPCQGES CHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA