| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682033
Identifier: 182682033
GI number: 182682033
Start: 1667598
End: 1668215
Strand: Direct
Name: 182682033
Synonym: XfasM23_1509
Alternate gene names: NA
Gene position: 1667598-1668215 (Clockwise)
Preceding gene: 182682032
Following gene: 182682034
Centisome position: 65.77
GC content: 38.83
Gene sequence:
>618_bases ATGAATATTCAAAGAGTATTTAAATCCCTACTGAAATTATGTGGACTGCTTGCACTTGCCTTGCTAATGGTATGCGGCGC TATTCTCTCCTGCGGGAAAAATAATATGACAAAAACAACACCGCATCAGGCCGCTGCAAAGAACATCAAGGAGGTTAGTA AAATAATGATGCTTCAATCGGATGATCACAGCTACAAAAAATGTTTCAAGTTTCCCCCAGAAGTGTGGCCGAGCCAATTT GGACCTGATATGATGATATTTCATTTCAAAAATATTGGTTATCTTTCTGGTATCGAAACATCTCCAGGTAATCTCGGTGA GGCCGGAACCTCGATAGTCTCCTTAGCCTTTTTCCCTGATCAACCATGGAAAGAATATTATATCCATGCCCGTTTGCCTG CTGGAAGCAATGAGCAAGTAGAAATCATGGGAGAATACAAAACATTCTATTTTTATAATCTCAGAGATTTCCTTTATTCG GCGATTGATAAGACTGGATTATTCAATATTGAATATCAACCTGGCCTACCAAGAAATAAAGAGGAGTGGACCCATGATTT ACAGTTAATTATTGATTTTGTTAATACCCATACCATCCCCTGTCAAGGAGAATCATGA
Upstream 100 bases:
>100_bases CACAACGCCGCGACGCACCGTCTATACGTACAGTGATGGATCAGGCCGACCACAAAGTTAATAAAATAAAGACACAGCAT CATCCTGCGGCGGTTTAATA
Downstream 100 bases:
>100_bases TGACAAGTTTAGATTTTTATTTTGACCAAGCCACGTTGGACCGTGCCAACACCTATAGAAATGCCGGGAATGACTGCGCG ATGTACCGGACATTATCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNIQRVFKSLLKLCGLLALALLMVCGAILSCGKNNMTKTTPHQAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSQF GPDMMIFHFKNIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKEYYIHARLPAGSNEQVEIMGEYKTFYFYNLRDFLYS AIDKTGLFNIEYQPGLPRNKEEWTHDLQLIIDFVNTHTIPCQGES
Sequences:
>Translated_205_residues MNIQRVFKSLLKLCGLLALALLMVCGAILSCGKNNMTKTTPHQAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSQF GPDMMIFHFKNIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKEYYIHARLPAGSNEQVEIMGEYKTFYFYNLRDFLYS AIDKTGLFNIEYQPGLPRNKEEWTHDLQLIIDFVNTHTIPCQGES >Mature_205_residues MNIQRVFKSLLKLCGLLALALLMVCGAILSCGKNNMTKTTPHQAAAKNIKEVSKIMMLQSDDHSYKKCFKFPPEVWPSQF GPDMMIFHFKNIGYLSGIETSPGNLGEAGTSIVSLAFFPDQPWKEYYIHARLPAGSNEQVEIMGEYKTFYFYNLRDFLYS AIDKTGLFNIEYQPGLPRNKEEWTHDLQLIIDFVNTHTIPCQGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23316; Mature: 23316
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQRVFKSLLKLCGLLALALLMVCGAILSCGKNNMTKTTPHQAAAKNIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPSQFGPDMMIFHFKNIGYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCHHEEEEEECCC QPWKEYYIHARLPAGSNEQVEIMGEYKTFYFYNLRDFLYSAIDKTGLFNIEYQPGLPRNK CCCHHEEEEEECCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCH EEWTHDLQLIIDFVNTHTIPCQGES HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNIQRVFKSLLKLCGLLALALLMVCGAILSCGKNNMTKTTPHQAAAKNIKEVSKIMMLQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC DDHSYKKCFKFPPEVWPSQFGPDMMIFHFKNIGYLSGIETSPGNLGEAGTSIVSLAFFPD CCHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCHHEEEEEECCC QPWKEYYIHARLPAGSNEQVEIMGEYKTFYFYNLRDFLYSAIDKTGLFNIEYQPGLPRNK CCCHHEEEEEECCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCH EEWTHDLQLIIDFVNTHTIPCQGES HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA