Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is wcaJ [H]

Identifier: 182682005

GI number: 182682005

Start: 1632035

End: 1633489

Strand: Reverse

Name: wcaJ [H]

Synonym: XfasM23_1480

Alternate gene names: 182682005

Gene position: 1633489-1632035 (Counterclockwise)

Preceding gene: 182682006

Following gene: 182682004

Centisome position: 64.42

GC content: 44.05

Gene sequence:

>1455_bases
ATGCTTCTGGCAGATCTGAACAGTGTTACTGATATTGCTTCTTCACCGCGGTTATTGTCGAAATATTCTGCTGCCGCTGA
TCTAATACTTCGTGTTTTTGATCTAACAATGGTGGTGCTGTCTGGTGTACTGATTTACAGATTGTTGTTTGGTAATTGGA
TGTTAACGGCCACATATCGTATTGCTATTGGTAACACGTTATTGTATTCGGTGATTTGTTTTTCTTTTTTCCCGTTGTAT
CGCAGTTGGCGTGGGCGTGCTCTGGCGCGGGAGCTGTTAGTAATTAGTAGTGCGTTCTGTGGTGTATTTATCTTGTTTTC
GTTGCATACACTGATTGTTCAATTGGGACATCCTGTGTCCTGGTTATGGATTACTTTCTGGTTCCTTGGTGCGCTCTCTA
CCTTGTTGAGTGCGCGTGTAGCGCTTCGTAGTCTACTCAACTGGTTGCATATGCGTGGTGTGGATGTCCAACGTATTGTT
GTGGTTGGGCTGCGTCATCCTGTGATGAAAATTCACCATTATCTGAATCGTAATACATGGACAGGGATGCAATTGATTGG
GTATTTCAGTACTTCCTACGATGTCTCTGTATCTGAATATGTGAGGCGTCTTCCGTGTCTTGGGATTCCGGATAGATTGT
TTGATTTTTTAGAAAAAAATCACGTTGAGCAAGTATGGATTTCGATGCCTCTCGGTGAGCGTGATTATATTAAGACGTTG
TTGAAGAAATTGGAGCGTTATCCGATCAATGTAAAACTTATTCCTGATTTATTCGACTTTGGCACACTCAATCAGTCGGG
TGAACAAATTGGTCATGTGCCTGTCATTAATCTTCGTCAGGGCGGGGTTGATCGAGATAACTACTTTTTTGTTGCCAAGA
CAATCCAGGATAAGGTGCTGGCCATGATTGCATTGCTATTGCTGTGGCCGTTGTTAATCATCATTGGGATTGGTATCAAG
TTCAGTTCCCCAGGTCCGGTATTGTTCCGGCAACGCCGCCATGGCTTGAATGGGCGTGAGTTTTATGTGCTCAAATTTCG
CTCGATGCGGGTGCATGACGATCAAAGTCAGCATCTGAAGCAAGCCAGTCGTAATGATAGTCGTATCACTGCTTTGGGTG
CGTTCCTGCGTCGCACCAGTCTGGATGAGTTACCACAAATCTTCAATGTACTTGGCGGCAGTATGTCGATTGTTGGCCCG
CGTCCTCATGCGGCTCAGCACAACAGTTATTACGAGAAGTTGATCCAGCATTACATGCAACGCCATTACGTCAAACCAGG
GATTACTGGGTGGGCGCAGGTCAACGGTTTTCGTGGTGAAACACAAGAATTAAGGACAATGAAAAAGCGTATTCAGTATG
ATCTTGATTACATCAGGCGCTGGTCATTGTGGTTCGATTTTAGAATTATTGTTTTGACTTTAGTACGTGTACTTGGTCAG
AAAAATGCTTATTGA

Upstream 100 bases:

>100_bases
ATGGTGGCAAATGCTGGTGAACGAAACCAACGTTGTCTGGTGGTGTGCGCTTGTTCCTCCCAAAATATGCGCTGCCCAGG
ATATGTGAGGAGTTCTATCA

Downstream 100 bases:

>100_bases
TCTTAGATGTTTCAGTCCATGCATGGTTGTGTCAGGAGAGTTTCCATGCTGATGTGTATGAAAAAGATCACCAAAGAGAA
TTCACGGAATCTTCTTGTTG

Product: undecaprenyl-phosphate glucose phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MLLADLNSVTDIASSPRLLSKYSAAADLILRVFDLTMVVLSGVLIYRLLFGNWMLTATYRIAIGNTLLYSVICFSFFPLY
RSWRGRALARELLVISSAFCGVFILFSLHTLIVQLGHPVSWLWITFWFLGALSTLLSARVALRSLLNWLHMRGVDVQRIV
VVGLRHPVMKIHHYLNRNTWTGMQLIGYFSTSYDVSVSEYVRRLPCLGIPDRLFDFLEKNHVEQVWISMPLGERDYIKTL
LKKLERYPINVKLIPDLFDFGTLNQSGEQIGHVPVINLRQGGVDRDNYFFVAKTIQDKVLAMIALLLLWPLLIIIGIGIK
FSSPGPVLFRQRRHGLNGREFYVLKFRSMRVHDDQSQHLKQASRNDSRITALGAFLRRTSLDELPQIFNVLGGSMSIVGP
RPHAAQHNSYYEKLIQHYMQRHYVKPGITGWAQVNGFRGETQELRTMKKRIQYDLDYIRRWSLWFDFRIIVLTLVRVLGQ
KNAY

Sequences:

>Translated_484_residues
MLLADLNSVTDIASSPRLLSKYSAAADLILRVFDLTMVVLSGVLIYRLLFGNWMLTATYRIAIGNTLLYSVICFSFFPLY
RSWRGRALARELLVISSAFCGVFILFSLHTLIVQLGHPVSWLWITFWFLGALSTLLSARVALRSLLNWLHMRGVDVQRIV
VVGLRHPVMKIHHYLNRNTWTGMQLIGYFSTSYDVSVSEYVRRLPCLGIPDRLFDFLEKNHVEQVWISMPLGERDYIKTL
LKKLERYPINVKLIPDLFDFGTLNQSGEQIGHVPVINLRQGGVDRDNYFFVAKTIQDKVLAMIALLLLWPLLIIIGIGIK
FSSPGPVLFRQRRHGLNGREFYVLKFRSMRVHDDQSQHLKQASRNDSRITALGAFLRRTSLDELPQIFNVLGGSMSIVGP
RPHAAQHNSYYEKLIQHYMQRHYVKPGITGWAQVNGFRGETQELRTMKKRIQYDLDYIRRWSLWFDFRIIVLTLVRVLGQ
KNAY
>Mature_484_residues
MLLADLNSVTDIASSPRLLSKYSAAADLILRVFDLTMVVLSGVLIYRLLFGNWMLTATYRIAIGNTLLYSVICFSFFPLY
RSWRGRALARELLVISSAFCGVFILFSLHTLIVQLGHPVSWLWITFWFLGALSTLLSARVALRSLLNWLHMRGVDVQRIV
VVGLRHPVMKIHHYLNRNTWTGMQLIGYFSTSYDVSVSEYVRRLPCLGIPDRLFDFLEKNHVEQVWISMPLGERDYIKTL
LKKLERYPINVKLIPDLFDFGTLNQSGEQIGHVPVINLRQGGVDRDNYFFVAKTIQDKVLAMIALLLLWPLLIIIGIGIK
FSSPGPVLFRQRRHGLNGREFYVLKFRSMRVHDDQSQHLKQASRNDSRITALGAFLRRTSLDELPQIFNVLGGSMSIVGP
RPHAAQHNSYYEKLIQHYMQRHYVKPGITGWAQVNGFRGETQELRTMKKRIQYDLDYIRRWSLWFDFRIIVLTLVRVLGQ
KNAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=415, Percent_Identity=38.7951807228916, Blast_Score=281, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 55949; Mature: 55949

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLADLNSVTDIASSPRLLSKYSAAADLILRVFDLTMVVLSGVLIYRLLFGNWMLTATYR
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
IAIGNTLLYSVICFSFFPLYRSWRGRALARELLVISSAFCGVFILFSLHTLIVQLGHPVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WLWITFWFLGALSTLLSARVALRSLLNWLHMRGVDVQRIVVVGLRHPVMKIHHYLNRNTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TGMQLIGYFSTSYDVSVSEYVRRLPCLGIPDRLFDFLEKNHVEQVWISMPLGERDYIKTL
CHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHEEEECCCCCHHHHHHH
LKKLERYPINVKLIPDLFDFGTLNQSGEQIGHVPVINLRQGGVDRDNYFFVAKTIQDKVL
HHHHHHCCCCEEECCCHHCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHH
AMIALLLLWPLLIIIGIGIKFSSPGPVLFRQRRHGLNGREFYVLKFRSMRVHDDQSQHLK
HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH
QASRNDSRITALGAFLRRTSLDELPQIFNVLGGSMSIVGPRPHAAQHNSYYEKLIQHYMQ
HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
RHYVKPGITGWAQVNGFRGETQELRTMKKRIQYDLDYIRRWSLWFDFRIIVLTLVRVLGQ
HHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNAY
CCCC
>Mature Secondary Structure
MLLADLNSVTDIASSPRLLSKYSAAADLILRVFDLTMVVLSGVLIYRLLFGNWMLTATYR
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
IAIGNTLLYSVICFSFFPLYRSWRGRALARELLVISSAFCGVFILFSLHTLIVQLGHPVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
WLWITFWFLGALSTLLSARVALRSLLNWLHMRGVDVQRIVVVGLRHPVMKIHHYLNRNTW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
TGMQLIGYFSTSYDVSVSEYVRRLPCLGIPDRLFDFLEKNHVEQVWISMPLGERDYIKTL
CHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHEEEECCCCCHHHHHHH
LKKLERYPINVKLIPDLFDFGTLNQSGEQIGHVPVINLRQGGVDRDNYFFVAKTIQDKVL
HHHHHHCCCCEEECCCHHCCCCCCCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHHHHH
AMIALLLLWPLLIIIGIGIKFSSPGPVLFRQRRHGLNGREFYVLKFRSMRVHDDQSQHLK
HHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH
QASRNDSRITALGAFLRRTSLDELPQIFNVLGGSMSIVGPRPHAAQHNSYYEKLIQHYMQ
HHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHH
RHYVKPGITGWAQVNGFRGETQELRTMKKRIQYDLDYIRRWSLWFDFRIIVLTLVRVLGQ
HHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNAY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]