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The map label for this gene is mtnB

Identifier: 182681875

GI number: 182681875

Start: 1482703

End: 1483359

Strand: Direct

Name: mtnB

Synonym: XfasM23_1343

Alternate gene names: 182681875

Gene position: 1482703-1483359 (Clockwise)

Preceding gene: 182681874

Following gene: 182681876

Centisome position: 58.47

GC content: 54.34

Gene sequence:

>657_bases
ATGAATGCCACTTGCACACCATCCCTGCCCTACGACGCGAGCCGTCTGCGCGAATTGGCGCATCTGTTGATCGGCACGAT
CAGCGAATTCGCTCAAGCAGGCTGGACACCAGCCACCAGTAGCAATTTCTCGCACCGTCTGGATGAACATCATGTGGCTA
TCACCGTCTCCGGCCGCGATAAACGATGCTTGAGGGAAGAGGACATTATGGCCGTCGACTTGGACGGCAACGCCGTTGGA
CATCCGCATACTCCCTCGGCAGAGACGTTGTTACATACCCAACTGTACCGGCGCTTTCCTGAGATTGGCTGCGTATTGCA
TACCCACTCGCTAACACAAACGGTAGCCTCACGGGTGTACGCCGGGGCCGGTCACATTTCTCTGAAAGATTACGAGCTAC
TCAAGGCCTTTGCGGGGCACAGCACCCACGAAACAACCTTGGATGTGCCCGTCTTTTGCAACACTCAAAATATGAATATT
CTTGCTGCCCAGGTTGACACACTCCTGGACAAACAACGGATGTGGGGATATCTGATCAACGGGCACGGAATGTATACCTG
GGGCAACACACTCGCCGATGCGCGCCGCCACCTTGAGGCATTGGAATTTCTGCTGCACTGCGAACTGGACCTACTGAAAT
TACGTGGCTATCTTTGA

Upstream 100 bases:

>100_bases
AATTGGATGCTGATGAGCGTGTGGACTGTTCTTGGTTTTTCCCTGTACTTCAGTTACGGATATCGCCACAGCAAACTGCA
TCAAGAAAGCACCTGAGACA

Downstream 100 bases:

>100_bases
TACGCCGTTCCCTTTGCCATCGCATCACCCTTGATCATGAGCCGACTACGCATCTTCGACGATCACACCCCCGATACGCC
GTTCTTCGTCAGCAAAGAGC

Product: methylthioribulose-1-phosphate dehydratase

Products: NA

Alternate protein names: MTRu-1-P dehydratase

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNATCTPSLPYDASRLRELAHLLIGTISEFAQAGWTPATSSNFSHRLDEHHVAITVSGRDKRCLREEDIMAVDLDGNAVG
HPHTPSAETLLHTQLYRRFPEIGCVLHTHSLTQTVASRVYAGAGHISLKDYELLKAFAGHSTHETTLDVPVFCNTQNMNI
LAAQVDTLLDKQRMWGYLINGHGMYTWGNTLADARRHLEALEFLLHCELDLLKLRGYL

Sequences:

>Translated_218_residues
MNATCTPSLPYDASRLRELAHLLIGTISEFAQAGWTPATSSNFSHRLDEHHVAITVSGRDKRCLREEDIMAVDLDGNAVG
HPHTPSAETLLHTQLYRRFPEIGCVLHTHSLTQTVASRVYAGAGHISLKDYELLKAFAGHSTHETTLDVPVFCNTQNMNI
LAAQVDTLLDKQRMWGYLINGHGMYTWGNTLADARRHLEALEFLLHCELDLLKLRGYL
>Mature_218_residues
MNATCTPSLPYDASRLRELAHLLIGTISEFAQAGWTPATSSNFSHRLDEHHVAITVSGRDKRCLREEDIMAVDLDGNAVG
HPHTPSAETLLHTQLYRRFPEIGCVLHTHSLTQTVASRVYAGAGHISLKDYELLKAFAGHSTHETTLDVPVFCNTQNMNI
LAAQVDTLLDKQRMWGYLINGHGMYTWGNTLADARRHLEALEFLLHCELDLLKLRGYL

Specific function: Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. MtnB subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MTNB_XYLF2 (B2I5X2)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001830035.1
- ProteinModelPortal:   B2I5X2
- SMR:   B2I5X2
- GeneID:   6202209
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_1343
- HOGENOM:   HBG337716
- OMA:   EFLFECE
- ProtClustDB:   PRK09220
- HAMAP:   MF_01677
- InterPro:   IPR001303
- InterPro:   IPR017714
- Gene3D:   G3DSA:3.40.225.10
- TIGRFAMs:   TIGR03328

Pfam domain/function: PF00596 Aldolase_II; SSF53639 Aldolase_II_N

EC number: =4.2.1.109

Molecular weight: Translated: 24385; Mature: 24385

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATCTPSLPYDASRLRELAHLLIGTISEFAQAGWTPATSSNFSHRLDEHHVAITVSGRD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCC
KRCLREEDIMAVDLDGNAVGHPHTPSAETLLHTQLYRRFPEIGCVLHTHSLTQTVASRVY
CCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHCEEEEHHHHHHHHHHHHH
AGAGHISLKDYELLKAFAGHSTHETTLDVPVFCNTQNMNILAAQVDTLLDKQRMWGYLIN
CCCCCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCCCEEHHHHHHHHHHHHHHCEEEEC
GHGMYTWGNTLADARRHLEALEFLLHCELDLLKLRGYL
CCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MNATCTPSLPYDASRLRELAHLLIGTISEFAQAGWTPATSSNFSHRLDEHHVAITVSGRD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCC
KRCLREEDIMAVDLDGNAVGHPHTPSAETLLHTQLYRRFPEIGCVLHTHSLTQTVASRVY
CCHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHCEEEEHHHHHHHHHHHHH
AGAGHISLKDYELLKAFAGHSTHETTLDVPVFCNTQNMNILAAQVDTLLDKQRMWGYLIN
CCCCCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCCCEEHHHHHHHHHHHHHHCEEEEC
GHGMYTWGNTLADARRHLEALEFLLHCELDLLKLRGYL
CCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA